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MW476490.1__QRD99602.1__X__00045
Bact-VirMW476490.1__QRD99602.1__X__00045
Identity
- Accession:
- MW476490 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-140
Domain cluster:
rep: MG020111.1__ATN94173.1__Lb_9__00009__D89-185
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.76 | 62.0 | 6.06e-01 | 100.0% | 81.2% |
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.60 | 53.0 | 4.96e-01 | 100.0% | 92.7% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.57 | 49.0 | 4.72e-01 | 100.0% | 86.0% |
| 2y27B01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 40.0 | 2.83e-01 | 77.5% | 67.7% |
| 2z5bA00 | 3.30.230.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 50.0 | 4.48e-01 | 100.0% | 96.1% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.53 | 29.0 | 3.01e-01 | 88.8% | 52.4% |
| 1dwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.82e-01 | 82.0% | 90.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3506831 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.65 | 42.0 | 4.41e-01 | 100.0% | 72.5% |
| 4014935 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 42.0 | 3.16e-01 | 77.5% | 92.7% |
| 6742 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.58 | 24.0 | 3.43e-01 | 78.7% | 89.2% |
| 5010972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 41.0 | 3.07e-01 | 77.5% | 92.9% |
| 3724902 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.54 | 48.0 | 3.96e-01 | 100.0% | 60.0% |
| 4961017 | 101.1.1.552 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF5806 | 0.54 | 37.0 | 3.90e-01 | 100.0% | 84.0% |
| 1887682 | 2008.1.1.70 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_BsaWI | 0.54 | 37.0 | 2.66e-01 | 84.3% | 23.0% |
| 5043918 | 7579.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_2 | 0.52 | 46.0 | 3.27e-01 | 100.0% | 35.4% |
| 3188672 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.51 | 43.0 | 3.23e-01 | 98.9% | 79.1% |
| 4950759 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 43.0 | 3.12e-01 | 100.0% | 85.3% |