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MW478291.1__QTZ82918.1__phiCPD_00036__00036

Bact-Vir

MW478291.1__QTZ82918.1__phiCPD_00036__00036

Identity

Accession:
MW478291 ↗
Kingdom:
phage

Quality

79.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_phiCp-D

TaxID: 2814704

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-64
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 52.0 4.72e-01 75.5% 52.9%
5exeA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.54 41.0 2.71e-01 84.9% 78.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050855 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.72 55.0 5.48e-01 88.7% 80.0%
3586991 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.64 46.0 4.09e-01 75.5% 54.7%
3705170 2006.1.4.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.61 48.0 3.12e-01 86.8% 19.6%
3489266 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 44.0 2.86e-01 81.1% 39.6%
2074163 2484.1.1.32 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C 0.57 46.0 2.93e-01 86.8% 36.8%
5069997 606.1.1.1 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.55 43.0 3.39e-01 83.0% 48.6%
D2 medium residues 74-127
PDB
Domain cluster: representative