Back to structures

MW478291.1__QTZ82920.1__phiCPD_00038__00038

Bact-Vir

MW478291.1__QTZ82920.1__phiCPD_00038__00038

Identity

Accession:
MW478291 ↗
Kingdom:
phage

Quality

70.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-109
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06970.19 best RepA_N 77.7 1.10e-21 100.0% 82.6%
CATH (98)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 61.0 6.94e-01 92.3% 97.1%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 5.96e-01 92.3% 80.0%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 52.0 5.45e-01 86.8% 70.2%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 54.0 6.21e-01 87.9% 95.4%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 4.94e-01 96.7% 49.3%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 6.49e-01 98.9% 84.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 53.0 6.31e-01 89.0% 98.4%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.87e-01 86.8% 71.3%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 52.0 6.18e-01 86.8% 98.4%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.27e-01 100.0% 83.7%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.55e-01 100.0% 69.5%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.96e-01 98.9% 78.7%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 51.0 6.08e-01 85.7% 98.3%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 57.0 5.58e-01 95.6% 68.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 6.01e-01 95.6% 72.4%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 6.25e-01 86.8% 97.0%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.65e-01 94.5% 72.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 57.0 5.48e-01 93.4% 65.4%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 49.0 5.99e-01 85.7% 98.3%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.78e-01 96.7% 70.6%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 4.75e-01 96.7% 45.9%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 4.85e-01 100.0% 49.6%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.83e-01 94.5% 75.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 53.0 6.23e-01 87.9% 98.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.74e-01 94.5% 69.9%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 53.0 5.67e-01 85.7% 80.5%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.83e-01 95.6% 73.5%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.18e-01 100.0% 53.7%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.26e-01 94.5% 62.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 5.05e-01 97.8% 51.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 6.18e-01 100.0% 89.7%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.04e-01 100.0% 50.7%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 5.94e-01 85.7% 82.1%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.99e-01 97.8% 52.3%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 5.57e-01 94.5% 72.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 5.13e-01 100.0% 52.1%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.86e-01 87.9% 86.7%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 52.0 6.11e-01 86.8% 98.4%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 6.24e-01 90.1% 97.2%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 4.90e-01 100.0% 48.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 50.0 5.03e-01 87.9% 64.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.87e-01 97.8% 50.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 5.27e-01 86.8% 70.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 5.33e-01 93.4% 63.4%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 4.81e-01 100.0% 47.1%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.87e-01 93.4% 80.2%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 5.81e-01 93.4% 90.1%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 6.02e-01 87.9% 88.5%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 4.47e-01 96.7% 44.5%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 4.83e-01 100.0% 50.0%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.63e-01 89.0% 83.1%
1cf7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.68e-01 87.9% 91.0%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 5.52e-01 95.6% 67.9%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.03e-01 100.0% 53.7%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 6.06e-01 100.0% 85.1%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 4.84e-01 96.7% 51.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.89e-01 87.9% 97.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.10e-01 87.9% 63.8%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 6.00e-01 85.7% 100.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 6.13e-01 100.0% 88.2%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 4.95e-01 100.0% 53.3%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.75 55.0 6.11e-01 89.0% 98.6%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 49.0 5.66e-01 87.9% 93.8%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.16e-01 94.5% 55.2%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 6.30e-01 100.0% 94.1%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 4.87e-01 96.7% 55.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.11e-01 87.9% 65.7%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.80e-01 98.9% 84.3%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 6.19e-01 100.0% 90.1%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.25e-01 93.4% 73.4%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.07e-01 87.9% 66.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.16e-01 90.1% 68.9%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.51e-01 100.0% 83.5%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.72 46.0 4.61e-01 87.9% 63.4%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.68e-01 86.8% 58.9%
3dptB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.82e-01 86.8% 100.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.98e-01 100.0% 95.1%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 5.29e-01 98.9% 73.3%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.76e-01 100.0% 88.5%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.71 52.0 5.81e-01 86.8% 100.0%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 6.00e-01 100.0% 97.6%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.42e-01 98.9% 80.9%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.70 63.0 5.71e-01 100.0% 95.1%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.69 56.0 5.16e-01 86.8% 96.5%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.69 53.0 5.57e-01 85.7% 90.1%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.30e-01 85.7% 77.6%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 5.03e-01 94.5% 72.3%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.64e-01 98.9% 92.9%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 5.06e-01 86.8% 86.1%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.68 54.0 5.61e-01 89.0% 90.6%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.63e-01 100.0% 94.1%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.47e-01 100.0% 80.2%
3jamZ00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 42.0 4.72e-01 86.8% 82.9%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 59.0 5.30e-01 100.0% 84.3%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 5.10e-01 98.9% 95.6%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.55 48.0 3.39e-01 95.6% 53.4%
2gytA01 1.10.287.2070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 33.0 3.57e-01 90.1% 74.6%
1v4aA03 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 40.0 3.42e-01 81.3% 52.3%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4392336 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.95 92.0 7.71e-01 100.0% 68.6%
3989576 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.94 90.0 7.93e-01 100.0% 74.4%
3587236 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.94 90.0 7.35e-01 100.0% 64.0%
1298616 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.91 85.0 7.35e-01 100.0% 68.2%
5041252 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.86 60.0 6.62e-01 100.0% 88.0%
3954543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.83 63.0 5.30e-01 97.8% 50.3%
3617783 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 53.0 5.55e-01 86.8% 70.6%
5051837 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 64.0 4.87e-01 100.0% 37.9%
5025922 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.82 55.0 5.83e-01 87.9% 77.5%
5053846 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.82 57.0 5.87e-01 90.1% 76.5%
3909408 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.82 54.0 5.93e-01 87.9% 82.7%
5029703 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 57.0 6.25e-01 94.5% 89.2%
3223085 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.81 56.0 5.63e-01 90.1% 71.1%
5023079 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.81 62.0 6.58e-01 97.8% 91.3%
3169446 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.81 60.0 6.64e-01 93.4% 100.0%
4984847 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.81 56.0 6.48e-01 86.8% 100.0%
4968342 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 58.0 5.55e-01 100.0% 65.7%
5054024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 57.0 6.34e-01 89.0% 95.7%
5040871 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 52.0 5.48e-01 84.6% 75.0%
3978394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 54.0 6.28e-01 83.5% 98.5%
3503709 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.79 53.0 5.86e-01 89.0% 85.1%
3495862 101.1.2.383 alpha arrays › HTH › HTH › winged helix domain › HTH_69 0.79 56.0 5.47e-01 87.9% 67.0%
5049803 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 51.0 6.04e-01 84.6% 100.0%
3990362 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 54.0 5.85e-01 87.9% 85.3%
5026287 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.78 59.0 5.86e-01 96.7% 75.8%
4982742 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 53.0 6.16e-01 85.7% 98.5%
5010592 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.78 55.0 4.96e-01 87.9% 55.0%
3364232 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.78 61.0 6.28e-01 94.5% 88.2%
3837515 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 53.0 5.26e-01 89.0% 67.4%
3505845 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.78 65.0 6.33e-01 100.0% 82.0%
5066463 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.78 54.0 6.25e-01 86.8% 100.0%
4424248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 6.44e-01 95.6% 93.8%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.77 56.0 5.10e-01 86.8% 57.5%
3462675 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.77 60.0 6.24e-01 89.0% 89.2%
5036720 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 60.0 6.22e-01 100.0% 89.3%
5075560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 5.63e-01 95.6% 61.9%
5043135 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.76 55.0 5.44e-01 90.1% 71.6%
4593646 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 6.14e-01 100.0% 85.6%
5013440 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 5.03e-01 100.0% 52.9%
1289805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 55.0 6.13e-01 87.9% 97.1%
3287283 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 5.25e-01 100.0% 64.5%
4992669 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.75 52.0 5.55e-01 87.9% 81.2%
4983310 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 58.0 5.63e-01 94.5% 74.0%
5029087 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 55.0 5.85e-01 92.3% 87.5%
3657246 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.75 52.0 5.16e-01 85.7% 68.4%
4033792 101.1.2.214 alpha arrays › HTH › HTH › winged helix domain › DnaD_N 0.75 62.0 5.37e-01 100.0% 59.3%
4425756 101.1.2.764 alpha arrays › HTH › HTH › winged helix domain › RP-C 0.75 70.0 5.88e-01 100.0% 69.0%
3306164 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.75 51.0 4.75e-01 87.9% 57.3%
3616235 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 5.73e-01 87.9% 85.0%
4979663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.63e-01 87.9% 83.7%
4999149 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.75 61.0 5.27e-01 100.0% 57.1%
5011654 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.75 54.0 6.03e-01 87.9% 98.6%
5050401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 58.0 5.64e-01 94.5% 75.0%
3513842 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.74 50.0 5.77e-01 86.8% 96.9%
3166551 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.74 67.0 6.08e-01 98.9% 80.0%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 5.59e-01 90.1% 82.1%
3577575 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.74 53.0 5.66e-01 87.9% 85.0%
3549643 101.1.2.197 alpha arrays › HTH › HTH › winged helix domain › APAF-1-like_WHD 0.74 54.0 5.60e-01 100.0% 82.4%
5081211 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 48.0 5.50e-01 86.8% 92.3%
5031186 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.74 54.0 5.85e-01 90.1% 92.0%
3516793 101.1.2.197 alpha arrays › HTH › HTH › winged helix domain › APAF-1-like_WHD 0.74 56.0 5.39e-01 100.0% 70.5%
3821131 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.73 56.0 5.86e-01 85.7% 88.0%
3500170 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.74e-01 100.0% 84.4%
5075009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 5.32e-01 86.8% 73.7%
3652823 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 5.18e-01 86.8% 78.8%
5029803 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 4.74e-01 86.8% 54.6%
4098952 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.72 48.0 5.13e-01 86.8% 78.8%
1284299 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.72 59.0 4.92e-01 100.0% 52.3%
3932917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 5.76e-01 89.0% 86.7%
5044327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.61e-01 95.6% 78.0%
5001123 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 4.84e-01 93.4% 67.4%
3588171 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.71 59.0 5.04e-01 100.0% 56.6%
4947731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 48.0 4.81e-01 94.5% 67.4%
3174392 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 5.74e-01 89.0% 92.5%
3179548 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.71 50.0 5.63e-01 86.8% 95.7%
5069541 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.70 66.0 6.24e-01 100.0% 86.7%
3938065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 5.77e-01 87.9% 97.3%
5018207 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.70 59.0 5.54e-01 90.1% 83.6%
3467443 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.69 54.0 5.00e-01 93.4% 66.1%
4941556 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.36e-01 94.5% 76.0%
3486989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 5.31e-01 86.8% 94.3%
5046721 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.95e-01 94.5% 75.6%
4938704 101.1.2.750 alpha arrays › HTH › HTH › winged helix domain › PF27374 0.68 57.0 5.52e-01 100.0% 82.0%
3403298 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.20e-01 87.9% 47.6%
2137469 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.68 55.0 4.74e-01 100.0% 55.9%
4467985 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.67 56.0 5.48e-01 90.1% 86.0%
3936891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 52.0 5.20e-01 87.9% 81.1%
3370279 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.66 48.0 5.02e-01 86.8% 84.3%
3602011 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 59.0 4.83e-01 100.0% 98.2%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.64 53.0 4.78e-01 100.0% 65.6%
3829353 101.1.2.641 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 0.64 51.0 3.24e-01 89.0% 25.8%
4957834 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.63 51.0 4.72e-01 100.0% 67.5%
3725287 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 51.0 5.26e-01 87.9% 92.9%
4964911 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.58 47.0 4.29e-01 100.0% 64.8%
3601429 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 50.0 4.69e-01 97.8% 97.3%
D2 high residues 189-279
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07261.17 best DnaB_2 34.8 1.60e-08 83.5% 96.0%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zc2A00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.89 69.0 7.58e-01 80.2% 100.0%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.84 60.0 6.51e-01 74.7% 100.0%
4ye6A01 1.10.8.1290 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 0.68 54.0 5.23e-01 93.4% 76.0%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 50.0 5.16e-01 83.5% 94.0%
3ct9B01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.62 53.0 3.95e-01 96.7% 90.4%
2lwxA00 1.10.8.840 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain 0.59 42.0 4.27e-01 75.8% 83.0%
4akgA14 1.20.1280.160 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 39.0 3.65e-01 82.4% 59.6%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 37.0 3.88e-01 81.3% 81.0%
3er9B01 1.20.1270.320 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Poxvirus poly(A) polymerase, N domain 0.52 37.0 3.56e-01 74.7% 90.6%
7smgD00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.52 39.0 3.44e-01 82.4% 99.3%
3ptwA01 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.52 43.0 3.26e-01 95.6% 65.9%
4qbuA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.51 43.0 3.23e-01 94.5% 72.2%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3989035 4230.1.1.3 alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.92 83.0 8.23e-01 95.6% 93.7%
4048400 4230.1.1.3 alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.87 74.0 7.65e-01 91.2% 100.0%
3587918 4230.1.1.3 alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.85 76.0 7.48e-01 96.7% 94.7%
4995693 4230.1.1.0 alpha arrays › DnaD domain › DnaD domain › DnaD domain 0.82 59.0 6.45e-01 76.9% 90.7%
3724273 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 54.0 5.59e-01 92.3% 97.6%
3736764 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.58 41.0 3.32e-01 72.5% 49.4%
4825592 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.56 47.0 4.00e-01 100.0% 84.9%
4078112 592.1.1.1 alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.54 37.0 3.95e-01 81.3% 81.0%
4995336 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 47.0 3.51e-01 100.0% 49.3%
4582072 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.51 46.0 3.38e-01 98.9% 42.9%
4026102 592.1.1.1 alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.51 35.0 3.78e-01 81.3% 85.3%