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MW478291.1__QTZ82962.1__phiCPD_00080__00080
Bact-VirMW478291.1__QTZ82962.1__phiCPD_00080__00080
Identity
- Accession:
- MW478291 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-78
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 51.0 | 5.16e-01 | 84.4% | 73.7% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 45.0 | 4.77e-01 | 98.7% | 88.1% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.50e-01 | 84.4% | 84.6% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.54 | 39.0 | 3.74e-01 | 76.6% | 86.7% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 41.0 | 4.42e-01 | 81.8% | 100.0% |
| 1q25A02 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.51 | 37.0 | 3.04e-01 | 77.9% | 91.0% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 38.0 | 3.35e-01 | 81.8% | 93.4% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 38.0 | 3.35e-01 | 81.8% | 95.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 54.0 | 5.46e-01 | 100.0% | 80.0% |
| 4012002 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 52.0 | 5.47e-01 | 96.1% | 88.6% |
| 3172122 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 50.0 | 5.59e-01 | 81.8% | 98.3% |
| 3585510 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 5.21e-01 | 85.7% | 75.3% |
| 3787905 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.67 | 52.0 | 5.44e-01 | 89.6% | 92.9% |
| 3789132 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.67 | 61.0 | 4.29e-01 | 100.0% | 35.6% |
| 160765 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.66 | 55.0 | 5.50e-01 | 92.2% | 89.6% |
| 3373298 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 47.0 | 3.34e-01 | 93.5% | 25.4% |
| 5057134 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.64 | 45.0 | 4.53e-01 | 100.0% | 72.5% |
| 3741069 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.63 | 57.0 | 3.88e-01 | 100.0% | 31.7% |
| 3828371 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 45.0 | 4.38e-01 | 87.0% | 69.4% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 46.0 | 4.72e-01 | 98.7% | 82.7% |
| 2541236 | 3820.1.1.0 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain | 0.60 | 53.0 | 4.97e-01 | 100.0% | 87.5% |
| 3653487 | 4.1.1.324 ↗ | beta barrels › SH3 › SH3 › SH3 › Nodulin_C | 0.56 | 43.0 | 4.11e-01 | 83.1% | 88.9% |
| 3741267 | 207.1.1.454 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DIPSY | 0.55 | 30.0 | 3.64e-01 | 92.2% | 84.0% |
| 3335867 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.53 | 46.0 | 3.95e-01 | 97.4% | 75.2% |
| 3490040 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.52 | 45.0 | 4.06e-01 | 100.0% | 89.0% |