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MW507126.1__QRI45094.1__SEA_SHOCKER_40__00040
Bact-VirMW507126.1__QRI45094.1__SEA_SHOCKER_40__00040
Identity
- Accession:
- MW507126 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 2805839
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-153
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.68 | 58.0 | 6.06e-01 | 100.0% | 98.6% |
| 3thxA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.66 | 56.0 | 5.44e-01 | 100.0% | 83.0% |
| 2qxlB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 52.0 | 5.49e-01 | 100.0% | 96.3% |
| 2aa4A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 54.0 | 5.62e-01 | 100.0% | 99.3% |
| 3zeuB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 58.0 | 5.57e-01 | 100.0% | 86.0% |
| 2hoeA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 55.0 | 5.57e-01 | 100.0% | 93.4% |
| 1z05A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 53.0 | 5.35e-01 | 100.0% | 90.3% |
| 4a2bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 51.0 | 5.31e-01 | 99.3% | 98.6% |
| 4ijaB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 54.0 | 5.35e-01 | 100.0% | 93.6% |
| 3by5A00 | 3.30.420.180 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain | 0.58 | 44.0 | 4.88e-01 | 100.0% | 97.6% |
| 2fsjA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 52.0 | 4.92e-01 | 100.0% | 99.4% |
| 4gniB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 51.0 | 5.09e-01 | 100.0% | 99.3% |
| 5lltA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 35.0 | 3.19e-01 | 100.0% | 46.3% |
| 2d1fA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 3.81e-01 | 86.8% | 68.9% |
| 1w97L01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 48.0 | 4.82e-01 | 100.0% | 93.5% |
| 2c42A02 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 40.0 | 3.96e-01 | 100.0% | 74.5% |
| 4xgqA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 37.0 | 3.99e-01 | 98.7% | 84.1% |
| 1tdjA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 3.77e-01 | 87.5% | 79.8% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.51 | 41.0 | 4.12e-01 | 100.0% | 84.9% |
| 1a5aB02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.72e-01 | 87.5% | 85.8% |
| 1v71A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.68e-01 | 86.8% | 76.5% |
| 5xemB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 3.78e-01 | 87.5% | 82.4% |
| 1tezA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 37.0 | 4.02e-01 | 98.7% | 92.2% |
| 2iu4A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.50 | 40.0 | 3.91e-01 | 100.0% | 76.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4533527 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.75 | 63.0 | 6.60e-01 | 100.0% | 97.1% |
| 4659593 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.71 | 58.0 | 6.10e-01 | 100.0% | 93.5% |
| 4278305 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.71 | 60.0 | 6.30e-01 | 100.0% | 98.6% |
| 4067776 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.70 | 58.0 | 5.92e-01 | 100.0% | 89.7% |
| 4114093 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.70 | 58.0 | 6.13e-01 | 99.3% | 97.8% |
| 4118739 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.70 | 59.0 | 6.06e-01 | 100.0% | 93.1% |
| 4355370 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.69 | 57.0 | 5.86e-01 | 100.0% | 89.7% |
| 4306325 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.69 | 59.0 | 5.97e-01 | 100.0% | 91.3% |
| 4543638 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.69 | 65.0 | 6.33e-01 | 100.0% | 93.9% |
| 4996735 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 61.0 | 5.72e-01 | 99.3% | 78.9% |
| 4998772 | 2484.1.1.337 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR | 0.68 | 62.0 | 6.04e-01 | 99.3% | 89.1% |
| 4229239 | 2484.1.1.85 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III | 0.68 | 63.0 | 5.40e-01 | 100.0% | 71.1% |
| 4108976 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.68 | 57.0 | 5.68e-01 | 100.0% | 86.5% |
| 3784998 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.67 | 63.0 | 5.16e-01 | 100.0% | 83.0% |
| 4999907 | 2484.1.1.337 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR | 0.67 | 62.0 | 5.04e-01 | 99.3% | 66.2% |
| 4979515 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 59.0 | 6.00e-01 | 100.0% | 95.3% |
| 3457302 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.66 | 58.0 | 5.58e-01 | 100.0% | 82.4% |
| 3596162 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 60.0 | 5.52e-01 | 98.7% | 77.4% |
| 4391834 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.65 | 56.0 | 5.79e-01 | 100.0% | 96.5% |
| 3781316 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 41.0 | 4.57e-01 | 100.0% | 82.6% |
| 4602919 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.62 | 51.0 | 5.22e-01 | 100.0% | 89.3% |
| 3975477 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.62 | 54.0 | 5.49e-01 | 100.0% | 95.3% |
| 4485089 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.61 | 52.0 | 5.29e-01 | 100.0% | 92.0% |
| None | — | 0.60 | 44.0 | 3.75e-01 | 100.0% | 48.5% | |
| 3356026 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.60 | 43.0 | 3.64e-01 | 100.0% | 44.7% |
| 3731515 | 301.1.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like | 0.60 | 39.0 | 4.52e-01 | 81.6% | 91.8% |
| 4355663 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.59 | 52.0 | 5.32e-01 | 99.3% | 97.9% |
| 3603301 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.58 | 43.0 | 4.51e-01 | 98.0% | 84.3% |
| 4098742 | 7542.1.1.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase | 0.58 | 36.0 | 3.52e-01 | 100.0% | 55.2% |
| 4177268 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.56 | 41.0 | 3.66e-01 | 100.0% | 53.0% |
| 4944349 | 2003.4.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PadR | 0.56 | 42.0 | 3.98e-01 | 100.0% | 65.0% |
| 4170189 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.56 | 46.0 | 3.50e-01 | 87.5% | 83.9% |
| 4993876 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.56 | 41.0 | 4.39e-01 | 98.7% | 87.4% |
| 3511076 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.55 | 41.0 | 4.24e-01 | 77.0% | 97.9% |
| 3506451 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.53 | 42.0 | 4.03e-01 | 82.2% | 84.7% |
| 5022614 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.53 | 44.0 | 4.25e-01 | 90.1% | 100.0% |
| 3360085 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.52 | 43.0 | 4.24e-01 | 96.7% | 84.4% |
| 3210647 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.52 | 32.0 | 3.47e-01 | 84.2% | 71.5% |
| 5065008 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 37.0 | 3.91e-01 | 98.7% | 83.3% |
| 3245781 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.51 | 44.0 | 3.90e-01 | 91.4% | 77.7% |
| 4001994 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.51 | 46.0 | 3.92e-01 | 100.0% | 95.2% |
| 3783994 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.50 | 45.0 | 3.63e-01 | 100.0% | 96.1% |