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MW512573.1__QVW56726.1__X__00004
Bact-VirMW512573.1__QVW56726.1__X__00004
Identity
- Accession:
- MW512573 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-207
Domain cluster:
rep: OQ789245.1__WIL01313.1__CRP6_000033__00033__D3-200
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tkrA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.76 | 43.0 | 4.57e-01 | 77.5% | 62.3% |
| 3ljbA00 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.74 | 61.0 | 5.98e-01 | 99.0% | 79.5% |
| 3snhA02 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.73 | 59.0 | 5.80e-01 | 99.5% | 78.7% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 39.0 | 4.10e-01 | 86.3% | 60.6% |
| 4gnkE00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.68 | 49.0 | 4.67e-01 | 73.0% | 90.6% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.68 | 37.0 | 4.96e-01 | 72.5% | 98.2% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.68 | 30.0 | 4.22e-01 | 95.6% | 83.3% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.67 | 52.0 | 4.95e-01 | 80.4% | 94.6% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.66 | 37.0 | 3.87e-01 | 76.0% | 57.8% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 37.0 | 4.89e-01 | 72.5% | 100.0% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.64 | 42.0 | 4.56e-01 | 93.6% | 77.6% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 37.0 | 4.30e-01 | 89.2% | 78.6% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.63 | 35.0 | 4.75e-01 | 71.1% | 100.0% |
| 7ocsB01 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 34.0 | 3.65e-01 | 80.4% | 59.5% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.61 | 41.0 | 4.60e-01 | 78.4% | 87.3% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.60 | 39.0 | 4.78e-01 | 76.5% | 100.0% |
| 7wujE01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 37.0 | 3.42e-01 | 88.7% | 46.6% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 32.0 | 4.07e-01 | 82.4% | 88.0% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.59 | 39.0 | 4.13e-01 | 94.1% | 73.9% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 34.0 | 3.58e-01 | 86.8% | 61.3% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 39.0 | 3.56e-01 | 90.2% | 51.3% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.57 | 35.0 | 4.36e-01 | 97.1% | 95.4% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 36.0 | 3.38e-01 | 95.1% | 50.8% |
| 3g5uA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 51.0 | 3.58e-01 | 99.5% | 90.7% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.55 | 32.0 | 4.02e-01 | 97.1% | 98.2% |
| 2g3bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 33.0 | 3.43e-01 | 93.1% | 61.5% |
| 2b1eA02 | 1.20.1310.30 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › | 0.55 | 33.0 | 3.81e-01 | 92.2% | 79.5% |
| 3bniB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 30.0 | 3.26e-01 | 90.2% | 62.6% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.54 | 38.0 | 4.01e-01 | 71.6% | 87.6% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 31.0 | 3.55e-01 | 94.6% | 75.9% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.53 | 36.0 | 4.24e-01 | 90.7% | 96.6% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 32.0 | 3.58e-01 | 92.2% | 75.3% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.53 | 38.0 | 4.03e-01 | 94.1% | 80.7% |
| 2b0hA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 32.0 | 3.93e-01 | 95.1% | 96.1% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.52 | 30.0 | 3.69e-01 | 92.6% | 89.6% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 31.0 | 3.78e-01 | 81.9% | 92.2% |
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 30.0 | 3.12e-01 | 94.1% | 59.5% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 33.0 | 3.62e-01 | 79.4% | 76.9% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.50 | 37.0 | 3.93e-01 | 98.5% | 87.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3232655 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.67 | 46.0 | 4.65e-01 | 95.1% | 68.8% |
| 3235811 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.66 | 41.0 | 4.45e-01 | 72.1% | 71.4% |
| 4178594 | 191.1.1.50 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › SlmA-like_C | 0.66 | 39.0 | 4.47e-01 | 86.8% | 79.1% |
| 4957784 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.62 | 42.0 | 4.66e-01 | 94.1% | 84.8% |
| 3618454 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.62 | 39.0 | 3.62e-01 | 90.2% | 48.5% |
| 3613994 | 192.29.1.19 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon | 0.58 | 33.0 | 3.53e-01 | 100.0% | 61.1% |
| 3939327 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.58 | 39.0 | 3.31e-01 | 92.2% | 40.0% |
| 3591522 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.57 | 44.0 | 4.28e-01 | 79.9% | 100.0% |
| 3413035 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.57 | 42.0 | 3.93e-01 | 96.1% | 61.6% |
| 3382881 | 601.4.1.41 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › Chloroplast_duf | 0.57 | 49.0 | 4.57e-01 | 93.6% | 80.0% |
| 3553862 | 4177.1.1.61 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C | 0.57 | 48.0 | 4.48e-01 | 90.2% | 96.5% |
| 4955062 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.57 | 34.0 | 3.71e-01 | 93.6% | 70.0% |
| 3932139 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.56 | 44.0 | 4.02e-01 | 98.0% | 61.1% |
| 3894003 | 601.1.3.9 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › A middle domain of Talin 1 › TRC8_N | 0.56 | 34.0 | 4.06e-01 | 98.0% | 90.8% |
| 3301462 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.56 | 40.0 | 4.44e-01 | 97.1% | 93.0% |
| 3170998 | 1075.1.1.20 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_CDR | 0.56 | 44.0 | 3.97e-01 | 98.0% | 59.6% |
| None | — | 0.56 | 44.0 | 4.09e-01 | 97.5% | 64.2% | |
| 3964369 | 6108.1.1.8 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Phage_Mu_F | 0.56 | 46.0 | 4.28e-01 | 93.1% | 70.4% |
| 4491682 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.55 | 44.0 | 3.84e-01 | 98.0% | 53.8% |
| 3741000 | 1075.1.1.20 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_CDR | 0.55 | 44.0 | 3.99e-01 | 98.0% | 62.6% |
| 4974774 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.55 | 42.0 | 4.13e-01 | 100.0% | 71.9% |
| 3630520 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.55 | 44.0 | 4.05e-01 | 98.0% | 64.5% |
| 3890306 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.55 | 44.0 | 3.91e-01 | 99.5% | 58.6% |
| 4020884 | 603.5.1.6 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › DUF6987 | 0.55 | 41.0 | 4.51e-01 | 100.0% | 94.5% |
| 3841137 | 109.4.1.662 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MEKK4_N | 0.54 | 37.0 | 3.64e-01 | 96.1% | 63.6% |
| 3475379 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.54 | 44.0 | 4.04e-01 | 99.5% | 64.8% |
| 3276259 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.54 | 42.0 | 3.86e-01 | 97.5% | 62.6% |
| 3929476 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.54 | 42.0 | 3.75e-01 | 98.0% | 57.9% |
| 3554799 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.54 | 30.0 | 3.75e-01 | 96.6% | 88.8% |
| 5019371 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.53 | 38.0 | 3.54e-01 | 94.1% | 56.2% |
| 3411719 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.53 | 41.0 | 3.88e-01 | 97.5% | 64.7% |
| 3965900 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.53 | 43.0 | 4.06e-01 | 99.5% | 70.0% |
| 3408320 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.53 | 42.0 | 3.84e-01 | 97.5% | 63.4% |
| 4648002 | 1075.1.1.20 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_CDR | 0.52 | 42.0 | 3.69e-01 | 100.0% | 57.3% |
| 5063888 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.52 | 39.0 | 3.85e-01 | 96.6% | 72.5% |
| 3724042 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.52 | 45.0 | 3.88e-01 | 93.6% | 62.2% |
| 5077995 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.51 | 38.0 | 3.89e-01 | 95.1% | 78.5% |
| 3744749 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.51 | 38.0 | 3.61e-01 | 96.6% | 62.9% |
| 5050754 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 36.0 | 3.64e-01 | 96.6% | 69.5% |
| 5022368 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.51 | 38.0 | 3.80e-01 | 96.1% | 75.1% |
| 4252453 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.51 | 39.0 | 3.75e-01 | 96.1% | 70.0% |
| 4953899 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.50 | 37.0 | 3.72e-01 | 96.1% | 74.1% |
D2
high
residues 339-426
Domain cluster:
rep: NC_009813.1__YP_001468708.1__LiPB054_gp04__00004__D270-338
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eb6A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.76 | 69.0 | 5.43e-01 | 100.0% | 74.0% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 50.0 | 4.55e-01 | 76.1% | 65.8% |
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.66 | 53.0 | 5.06e-01 | 95.5% | 73.1% |
| 4jiuA00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.66 | 52.0 | 4.94e-01 | 94.3% | 71.4% |
| 4q5eA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.65 | 34.0 | 3.42e-01 | 94.3% | 47.3% |
| 3hbvP01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.65 | 57.0 | 4.89e-01 | 96.6% | 83.3% |
| 2h1jA00 | 1.10.1370.30 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.65 | 55.0 | 3.40e-01 | 95.5% | 15.2% |
| 4ar9A01 | 3.40.30.160 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Collagenase ColT, N-terminal domain | 0.63 | 57.0 | 4.86e-01 | 100.0% | 86.6% |
| 4lrjA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.62 | 33.0 | 3.40e-01 | 94.3% | 50.6% |
| 7aqbB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.62 | 38.0 | 2.93e-01 | 97.7% | 27.6% |
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.62 | 55.0 | 5.08e-01 | 100.0% | 80.0% |
| 2epkX01 | 3.30.160.230 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase | 0.60 | 44.0 | 4.63e-01 | 97.7% | 87.5% |
| 4gr6B00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.58 | 39.0 | 3.69e-01 | 87.5% | 57.1% |
| 4gr2A00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.57 | 40.0 | 3.69e-01 | 86.4% | 58.2% |
| 1sy7A03 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.56 | 49.0 | 3.85e-01 | 100.0% | 81.5% |
| 4didB01 | 1.20.58.450 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog | 0.55 | 40.0 | 3.69e-01 | 87.5% | 59.6% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 39.0 | 4.16e-01 | 98.9% | 86.1% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 38.0 | 4.07e-01 | 90.9% | 87.8% |
| 1mugA00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.51 | 43.0 | 3.63e-01 | 98.9% | 90.9% |
| 1cjaA02 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.51 | 36.0 | 2.91e-01 | 75.0% | 52.5% |
| 2kx7A00 | 3.40.50.11620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase RcsD, RcsD-ABL domain | 0.50 | 44.0 | 4.12e-01 | 100.0% | 80.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3754954 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.72 | 58.0 | 4.21e-01 | 98.9% | 32.6% |
| 3957469 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.70 | 54.0 | 4.55e-01 | 96.6% | 48.7% |
| 5054258 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.69 | 55.0 | 4.66e-01 | 96.6% | 51.7% |
| 3386105 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.69 | 54.0 | 4.72e-01 | 96.6% | 56.2% |
| 5016438 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.69 | 53.0 | 4.40e-01 | 96.6% | 46.5% |
| 4074514 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.69 | 58.0 | 5.29e-01 | 95.5% | 69.6% |
| 185182 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.69 | 50.0 | 4.52e-01 | 76.1% | 64.7% |
| 4988454 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.68 | 55.0 | 5.33e-01 | 96.6% | 77.0% |
| 4966006 | 2498.1.1.163 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF5781 | 0.68 | 57.0 | 4.12e-01 | 98.9% | 32.9% |
| 4416753 | 2498.1.1.59 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_U49 | 0.68 | 60.0 | 4.22e-01 | 97.7% | 55.0% |
| 1314423 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.68 | 54.0 | 5.09e-01 | 95.5% | 70.6% |
| 3946602 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.67 | 59.0 | 5.32e-01 | 98.9% | 70.8% |
| 4938622 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 56.0 | 4.23e-01 | 89.8% | 47.8% |
| 3838568 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.67 | 53.0 | 5.06e-01 | 96.6% | 72.4% |
| 4261757 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.66 | 60.0 | 4.30e-01 | 100.0% | 40.8% |
| 1030676 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.66 | 52.0 | 4.94e-01 | 94.3% | 71.4% |
| 5011816 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.66 | 55.0 | 4.87e-01 | 93.2% | 64.6% |
| 5027859 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.65 | 57.0 | 4.96e-01 | 100.0% | 71.0% |
| 5047941 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 52.0 | 4.02e-01 | 93.2% | 40.0% |
| 3785907 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 53.0 | 4.96e-01 | 100.0% | 89.6% |
| 3999258 | 2498.1.1.2 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Astacin | 0.61 | 51.0 | 4.01e-01 | 89.8% | 96.1% |
| 4983979 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 50.0 | 4.54e-01 | 94.3% | 66.1% |
| 3962296 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 44.0 | 3.28e-01 | 78.4% | 35.2% |
| 3954373 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 44.0 | 3.05e-01 | 78.4% | 27.5% |
| None | — | 0.58 | 44.0 | 3.22e-01 | 80.7% | 30.4% | |
| 4935744 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.57 | 48.0 | 4.61e-01 | 95.5% | 79.0% |
| 4946487 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.54 | 48.0 | 3.43e-01 | 98.9% | 70.8% |
| 3781336 | 3252.2.1.0 ↗ | alpha arrays › SHQ1 C-terminal domain-like › Anaphase-promoting complex subunit 5 N-terminal domain › Anaphase-promoting complex subunit 5 N-terminal domain | 0.54 | 37.0 | 3.11e-01 | 92.0% | 40.0% |
| 3661136 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.53 | 42.0 | 3.45e-01 | 97.7% | 45.3% |
| 3621784 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 40.0 | 2.72e-01 | 81.8% | 59.7% |
D3
high
residues 428-536
Domain cluster:
rep: MK448737.1__QBX17416.1__Javan351_0032__00032__D490-588
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 39.0 | 3.94e-01 | 71.6% | 88.4% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 39.0 | 3.88e-01 | 71.6% | 80.5% |
| 6ko5A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 44.0 | 3.24e-01 | 85.3% | 83.2% |
| 8hixR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 44.0 | 3.31e-01 | 89.0% | 80.4% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.54 | 30.0 | 3.44e-01 | 100.0% | 73.2% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 43.0 | 4.26e-01 | 89.0% | 90.5% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 32.0 | 3.25e-01 | 78.0% | 57.7% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.52 | 36.0 | 3.99e-01 | 100.0% | 96.3% |
| 5bn3A04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.52 | 39.0 | 3.67e-01 | 81.7% | 64.0% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 37.0 | 3.44e-01 | 75.2% | 77.9% |
| 3uonA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 41.0 | 3.05e-01 | 84.4% | 80.3% |
| 6i9kA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.33e-01 | 99.1% | 83.5% |
| 5ujwD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 39.0 | 3.08e-01 | 83.5% | 90.4% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.51 | 39.0 | 3.42e-01 | 80.7% | 60.8% |
| 1lt7B00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.51 | 41.0 | 3.00e-01 | 88.1% | 81.3% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.50 | 39.0 | 3.68e-01 | 84.4% | 87.6% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 39.0 | 3.60e-01 | 84.4% | 77.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212662 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.60 | 46.0 | 3.47e-01 | 80.7% | 74.7% |
| 3991543 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 43.0 | 3.15e-01 | 79.8% | 89.5% |
| 3375825 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.57 | 37.0 | 3.50e-01 | 100.0% | 53.8% |
| 3923226 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 42.0 | 3.05e-01 | 83.5% | 79.0% |
| 3520909 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 43.0 | 3.27e-01 | 87.2% | 64.9% |
| 3213981 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 41.0 | 2.87e-01 | 86.2% | 75.3% |
| 3234607 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.51 | 44.0 | 3.43e-01 | 97.2% | 89.2% |
| 4002694 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 41.0 | 3.01e-01 | 92.7% | 77.3% |
D4
medium
residues 225-318
Domain cluster:
rep: KP836355.1__AJW76908.1__UF08_19__00019__D241-307
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.52 | 36.0 | 3.76e-01 | 72.3% | 98.9% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.50 | 31.0 | 3.18e-01 | 71.3% | 62.0% |