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MW514246.1__QSL99477.1__CRP9_gp62__00062
Bact-VirMW514246.1__QSL99477.1__CRP9_gp62__00062
Identity
- Accession:
- MW514246 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06568.17 best | YjiS-like | 33.6 | 3.70e-08 | 75.5% | 91.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.74 | 56.0 | 3.73e-01 | 95.9% | 21.3% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.72 | 67.0 | 4.99e-01 | 100.0% | 46.4% |
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.68 | 46.0 | 3.76e-01 | 89.8% | 38.9% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 4.59e-01 | 79.6% | 78.8% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 36.0 | 3.64e-01 | 71.4% | 68.8% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.53 | 40.0 | 3.04e-01 | 85.7% | 73.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969961 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.87 | 60.0 | 4.85e-01 | 87.8% | 41.2% |
| 4974808 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.76 | 68.0 | 4.01e-01 | 100.0% | 14.1% |
| 3499297 | 101.1.2.113 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 | 0.75 | 67.0 | 4.98e-01 | 100.0% | 75.0% |
| 4012810 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.74 | 62.0 | 5.08e-01 | 91.8% | 52.9% |
| 4970333 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.73 | 64.0 | 5.15e-01 | 100.0% | 53.7% |
| 3925650 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.66 | 57.0 | 3.53e-01 | 100.0% | 17.5% |
| 1174242 | 129.1.1.15 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer | 0.65 | 54.0 | 5.10e-01 | 100.0% | 78.7% |