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MW534375.1__QSL99779.1__SEA_ODAY_35__00035
Bact-VirMW534375.1__QSL99779.1__SEA_ODAY_35__00035
Identity
- Accession:
- MW534375 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.68 | 55.0 | 5.06e-01 | 88.0% | 80.4% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.68 | 52.0 | 4.06e-01 | 81.3% | 47.7% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.67 | 51.0 | 3.98e-01 | 81.3% | 47.8% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.65 | 37.0 | 4.17e-01 | 81.3% | 73.7% |
| 1mmuA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.65 | 50.0 | 3.27e-01 | 84.0% | 95.9% |
| 3kl7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 56.0 | 4.02e-01 | 97.3% | 95.5% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.64 | 53.0 | 4.13e-01 | 90.7% | 89.6% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.62 | 46.0 | 3.89e-01 | 80.0% | 88.9% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.29e-01 | 100.0% | 66.0% |
| 4u3qB00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 46.0 | 4.23e-01 | 90.7% | 61.6% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.61 | 46.0 | 3.84e-01 | 80.0% | 77.2% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.60 | 47.0 | 4.54e-01 | 86.7% | 77.3% |
| 1qi9A00 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.60 | 45.0 | 2.73e-01 | 82.7% | 45.0% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 46.0 | 3.87e-01 | 86.7% | 95.6% |
| 3v9fA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 49.0 | 3.22e-01 | 90.7% | 51.6% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 50.0 | 3.43e-01 | 100.0% | 90.4% |
| 4dnuA00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.57 | 45.0 | 2.90e-01 | 86.7% | 33.3% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 46.0 | 4.32e-01 | 92.0% | 83.5% |
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 49.0 | 3.25e-01 | 97.3% | 74.4% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.56 | 39.0 | 4.30e-01 | 76.0% | 91.7% |
| 2vhjA02 | 2.30.270.20 | Mainly Beta › Roll › duf1285 protein fold › | 0.56 | 28.0 | 3.07e-01 | 84.0% | 53.2% |
| 5xyig01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.22e-01 | 97.3% | 61.3% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.56 | 46.0 | 3.16e-01 | 96.0% | 67.6% |
| 5cxbA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 3.08e-01 | 97.3% | 54.4% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 46.0 | 3.21e-01 | 98.7% | 60.8% |
| 5hy7B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.21e-01 | 98.7% | 55.1% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 42.0 | 3.53e-01 | 88.0% | 46.6% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 31.0 | 3.34e-01 | 94.7% | 65.6% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.17e-01 | 98.7% | 49.4% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 47.0 | 2.99e-01 | 97.3% | 50.4% |
| 8f5pC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 3.07e-01 | 97.3% | 67.6% |
| 3dsoA00 | 2.40.10.300 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K | 0.52 | 40.0 | 4.26e-01 | 97.3% | 95.5% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 2.89e-01 | 97.3% | 98.1% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.50 | 40.0 | 3.66e-01 | 86.7% | 76.5% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3231343 | 77.1.1.10 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28998 | 0.74 | 53.0 | 4.42e-01 | 76.0% | 45.4% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.71 | 52.0 | 4.39e-01 | 78.7% | 46.4% |
| 3661496 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.71 | 52.0 | 3.37e-01 | 77.3% | 87.4% |
| 3715045 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.71 | 56.0 | 5.79e-01 | 86.7% | 100.0% |
| 4797891 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.70 | 52.0 | 5.43e-01 | 78.7% | 85.5% |
| 3707862 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.69 | 52.0 | 5.17e-01 | 81.3% | 88.7% |
| 3301044 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.69 | 50.0 | 3.65e-01 | 77.3% | 91.7% |
| 3764875 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.68 | 51.0 | 3.83e-01 | 81.3% | 44.2% |
| 3242234 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.66 | 56.0 | 3.36e-01 | 93.3% | 30.8% |
| 4012027 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.66 | 55.0 | 4.23e-01 | 90.7% | 64.2% |
| 3187834 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.66 | 55.0 | 4.75e-01 | 93.3% | 95.8% |
| 3616330 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.66 | 49.0 | 4.07e-01 | 80.0% | 45.9% |
| 3741303 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.66 | 54.0 | 5.25e-01 | 92.0% | 96.5% |
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.66 | 49.0 | 3.97e-01 | 81.3% | 50.0% |
| 4011286 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.66 | 55.0 | 4.37e-01 | 93.3% | 91.6% |
| 3935058 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.66 | 55.0 | 5.29e-01 | 93.3% | 90.6% |
| 4302456 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.66 | 54.0 | 5.09e-01 | 90.7% | 90.0% |
| 4291626 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.65 | 53.0 | 4.95e-01 | 90.7% | 84.2% |
| 3582941 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.64 | 50.0 | 4.55e-01 | 84.0% | 64.0% |
| 3272708 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.64 | 52.0 | 5.16e-01 | 90.7% | 100.0% |
| 3390746 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.64 | 48.0 | 3.58e-01 | 80.0% | 67.0% |
| 3169639 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.64 | 56.0 | 3.55e-01 | 100.0% | 78.0% |
| 3832937 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.62 | 55.0 | 3.62e-01 | 100.0% | 76.7% |
| 3717674 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.62 | 50.0 | 4.76e-01 | 89.3% | 86.7% |
| 3993370 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.62 | 52.0 | 3.53e-01 | 93.3% | 91.0% |
| 4025576 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 54.0 | 3.80e-01 | 98.7% | 64.5% |
| 3258100 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 52.0 | 3.18e-01 | 96.0% | 49.9% |
| 2526314 | 1205.2.1.1 ↗ | a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 | 0.61 | 34.0 | 3.18e-01 | 85.3% | 43.5% |
| 3655121 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 53.0 | 3.30e-01 | 100.0% | 66.2% |
| 4386761 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.60 | 50.0 | 4.60e-01 | 94.7% | 85.0% |
| 4355548 | 558.1.1.26 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › WD40 | 0.60 | 51.0 | 3.20e-01 | 98.7% | 66.0% |
| 3348260 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 51.0 | 3.47e-01 | 98.7% | 75.3% |
| 3264116 | 5.1.5.76 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N | 0.59 | 52.0 | 3.39e-01 | 100.0% | 73.1% |
| 3332664 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.59 | 51.0 | 3.17e-01 | 98.7% | 51.5% |
| 3678685 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.59 | 52.0 | 3.42e-01 | 100.0% | 64.2% |
| 3993013 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.58 | 51.0 | 3.38e-01 | 100.0% | 78.2% |
| 3600408 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 42.0 | 2.96e-01 | 78.7% | 45.5% |
| 3455400 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.58 | 48.0 | 3.18e-01 | 92.0% | 51.7% |
| 3341382 | 5.1.4.411 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF2415 | 0.57 | 51.0 | 3.20e-01 | 100.0% | 64.6% |
| 3392759 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 49.0 | 3.22e-01 | 100.0% | 77.5% |
| 3497267 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 50.0 | 3.26e-01 | 100.0% | 34.6% |
| 3624644 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 50.0 | 3.23e-01 | 97.3% | 39.2% |
| 3621408 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.56 | 49.0 | 3.19e-01 | 96.0% | 67.4% |
| 3706524 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.56 | 47.0 | 3.24e-01 | 97.3% | 80.3% |
| 3793797 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.55 | 48.0 | 3.21e-01 | 100.0% | 80.3% |
| 5022923 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.54 | 45.0 | 4.29e-01 | 88.0% | 91.8% |
| 3782489 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 2.90e-01 | 100.0% | 58.4% |
| 3594393 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 40.0 | 4.01e-01 | 84.0% | 91.3% |
| 4131958 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.52 | 43.0 | 3.57e-01 | 90.7% | 68.1% |
| 3398140 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.52 | 36.0 | 3.64e-01 | 73.3% | 100.0% |
| 4002544 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.52 | 43.0 | 2.64e-01 | 97.3% | 35.5% |