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MW534375.1__QSL99814.1__SEA_ODAY_70__00070

Bact-Vir

MW534375.1__QSL99814.1__SEA_ODAY_70__00070

Identity

Accession:
MW534375 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-72
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.55e-01 100.0% 88.5%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 48.0 3.88e-01 100.0% 37.6%
2e4mC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.66 56.0 4.45e-01 100.0% 94.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.52e-01 100.0% 70.3%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.65 55.0 4.01e-01 100.0% 82.6%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.92e-01 100.0% 90.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 44.0 4.86e-01 100.0% 88.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.22e-01 100.0% 61.6%
1ybiA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 54.0 4.26e-01 100.0% 99.3%
1shyA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 41.0 3.51e-01 100.0% 41.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 44.0 4.63e-01 100.0% 82.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.15e-01 100.0% 63.4%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 43.0 3.51e-01 73.0% 61.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.93e-01 100.0% 94.1%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 3.94e-01 100.0% 52.8%
3dfjA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 41.0 3.39e-01 100.0% 38.1%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 52.0 3.80e-01 100.0% 39.5%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.60 40.0 3.41e-01 100.0% 38.9%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 42.0 4.53e-01 100.0% 87.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.23e-01 100.0% 76.7%
3skvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 38.0 2.89e-01 100.0% 26.6%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 3.68e-01 100.0% 51.1%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.24e-01 100.0% 80.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 46.0 4.63e-01 87.3% 96.9%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.92e-01 74.6% 85.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 4.06e-01 95.2% 95.1%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 4.31e-01 87.3% 86.2%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 3.92e-01 100.0% 74.2%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.55 39.0 3.29e-01 100.0% 40.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.96e-01 100.0% 75.8%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 4.36e-01 100.0% 93.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.49e-01 100.0% 93.2%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.54e-01 100.0% 70.1%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.54 44.0 3.96e-01 100.0% 84.0%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.54 45.0 3.49e-01 100.0% 80.6%
1txjA00 2.170.150.10 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 0.54 38.0 2.97e-01 77.8% 87.9%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 43.0 3.97e-01 90.5% 95.2%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.27e-01 100.0% 87.5%
3ld7A00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.52 44.0 4.03e-01 100.0% 94.3%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.52 42.0 3.28e-01 100.0% 39.9%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.52 41.0 3.85e-01 92.1% 74.7%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.51 35.0 3.67e-01 100.0% 90.2%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 37.0 3.41e-01 82.5% 98.9%
3p02A02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.51 42.0 3.29e-01 100.0% 85.1%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031578 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 43.0 4.76e-01 100.0% 76.0%
4009281 219.1.1.65 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.70 49.0 4.19e-01 100.0% 44.8%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.81e-01 98.4% 73.8%
3404643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.86e-01 100.0% 71.4%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.65 44.0 4.29e-01 100.0% 64.3%
5000308 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.65 45.0 5.01e-01 100.0% 93.9%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.68e-01 100.0% 81.8%
5025079 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.62e-01 100.0% 81.8%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.64 44.0 4.38e-01 100.0% 69.2%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 44.0 4.45e-01 100.0% 72.3%
4863023 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 41.0 4.62e-01 96.8% 89.6%
3937333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.27e-01 100.0% 62.5%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 42.0 3.35e-01 100.0% 34.6%
3941004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.51e-01 100.0% 67.5%
3500448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.42e-01 100.0% 76.9%
3929784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.70e-01 100.0% 98.0%
540 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.60 40.0 4.42e-01 100.0% 93.8%
4163851 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 40.0 4.11e-01 100.0% 75.0%
3709029 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.31e-01 100.0% 78.3%
2575643 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.59 41.0 4.00e-01 100.0% 66.7%
3710823 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 39.0 4.25e-01 100.0% 86.0%
5014946 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.59 45.0 3.53e-01 100.0% 40.0%
4985969 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.27e-01 100.0% 81.7%
4658938 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.56 40.0 3.63e-01 100.0% 54.4%
4123180 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.56 40.0 3.84e-01 100.0% 65.3%
4359892 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.55 40.0 3.79e-01 100.0% 62.5%
3998645 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 42.0 4.20e-01 100.0% 81.5%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 41.0 4.01e-01 100.0% 75.4%
3931418 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.32e-01 100.0% 90.0%
3989574 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 41.0 3.73e-01 100.0% 62.4%
3668420 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.53 48.0 3.38e-01 100.0% 38.4%
3669214 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.53 47.0 3.70e-01 100.0% 56.2%
5010981 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 37.0 3.97e-01 88.9% 92.7%
3220929 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 38.0 3.71e-01 100.0% 74.7%
D2 high residues 76-130
PDB
Domain cluster: representative
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.92 83.0 5.82e-01 98.2% 34.9%
3nkzA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.88 78.0 6.37e-01 96.4% 58.8%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.88 81.0 5.05e-01 100.0% 21.7%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.87 79.0 5.82e-01 100.0% 48.1%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.86 78.0 5.47e-01 100.0% 41.6%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.86 77.0 6.88e-01 100.0% 85.7%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 77.0 6.92e-01 100.0% 72.4%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.86 77.0 6.40e-01 100.0% 68.1%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.85 77.0 5.61e-01 100.0% 41.3%
7odyC01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.85 67.0 5.51e-01 85.5% 50.0%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 77.0 5.83e-01 100.0% 55.3%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.85 75.0 5.61e-01 98.2% 65.4%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.85 78.0 7.04e-01 100.0% 98.6%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 75.0 6.79e-01 100.0% 88.0%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.84 68.0 7.06e-01 98.2% 94.1%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.84 75.0 4.87e-01 100.0% 26.3%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.84 76.0 4.63e-01 100.0% 17.6%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.82 71.0 6.90e-01 96.4% 86.9%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 72.0 6.59e-01 100.0% 84.9%
3rpmA02 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.82 64.0 5.38e-01 81.8% 61.2%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 72.0 5.86e-01 100.0% 55.3%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.81 73.0 6.19e-01 100.0% 94.4%
4akgA04 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.81 68.0 4.85e-01 94.5% 32.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.80 71.0 6.36e-01 100.0% 72.7%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.80 70.0 5.74e-01 100.0% 58.8%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.80 69.0 6.14e-01 100.0% 68.3%
3dytA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.80 64.0 4.38e-01 89.1% 52.6%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.80 70.0 6.73e-01 100.0% 89.1%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.80 69.0 6.64e-01 100.0% 90.6%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.80 66.0 5.27e-01 100.0% 46.0%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.79 69.0 6.61e-01 100.0% 93.8%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.79 65.0 5.55e-01 89.1% 67.1%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 69.0 5.62e-01 100.0% 58.7%
3ehfB01 6.10.250.2870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.78 68.0 5.56e-01 100.0% 58.7%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 69.0 6.16e-01 100.0% 89.7%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.78 68.0 5.42e-01 100.0% 50.0%
3t5vA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.77 59.0 3.68e-01 89.1% 15.7%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 63.0 5.68e-01 94.5% 66.7%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.76 65.0 6.12e-01 100.0% 87.1%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 59.0 5.49e-01 94.5% 67.1%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 4.94e-01 100.0% 42.2%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.75 62.0 4.98e-01 94.5% 48.2%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 63.0 6.13e-01 100.0% 90.5%
2kp8A00 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 62.0 5.69e-01 98.2% 72.2%
4l8eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.73 63.0 5.08e-01 100.0% 50.9%
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.73 61.0 5.36e-01 96.4% 66.7%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.72 63.0 3.91e-01 100.0% 17.5%
2zxeA02 1.20.1110.10 Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain 0.72 59.0 3.47e-01 92.7% 12.0%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.72 63.0 4.04e-01 100.0% 33.3%
3dmqA08 6.10.140.1500 Special › Helix non-globular › Helix Hairpins › 0.72 60.0 5.38e-01 100.0% 66.3%
4nswB01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.72 63.0 4.07e-01 100.0% 21.5%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.71 55.0 5.74e-01 85.5% 97.9%
2b3tB01 6.10.140.1980 Special › Helix non-globular › Helix Hairpins › 0.71 57.0 5.44e-01 90.9% 87.7%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 59.0 4.75e-01 94.5% 47.8%
1b06A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.70 61.0 5.79e-01 100.0% 92.5%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 59.0 4.93e-01 100.0% 52.8%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 58.0 5.44e-01 100.0% 85.9%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 56.0 5.14e-01 98.2% 67.5%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 57.0 5.34e-01 100.0% 78.1%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 58.0 4.83e-01 100.0% 53.5%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.69 55.0 4.87e-01 94.5% 63.2%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.69 54.0 5.14e-01 94.5% 100.0%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 58.0 5.49e-01 100.0% 81.2%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 54.0 4.95e-01 90.9% 66.2%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.68 56.0 3.39e-01 96.4% 13.1%
6ygiB01 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.68 57.0 4.31e-01 100.0% 51.4%
1grjA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.67 56.0 5.22e-01 100.0% 79.7%
2d2sA02 1.20.58.1220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain 0.67 57.0 4.76e-01 98.2% 94.1%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 56.0 5.14e-01 100.0% 70.5%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.67 59.0 5.36e-01 100.0% 86.5%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 58.0 5.65e-01 100.0% 96.7%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 57.0 4.98e-01 100.0% 63.5%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.66 55.0 5.04e-01 100.0% 84.2%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.66 58.0 5.01e-01 100.0% 66.3%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.65 49.0 5.02e-01 87.3% 92.2%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.62 52.0 4.78e-01 100.0% 73.1%
3ns4A00 1.10.357.110 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus 0.62 54.0 3.70e-01 100.0% 30.2%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.62 51.0 4.78e-01 100.0% 100.0%
1z9hA03 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 50.0 3.81e-01 100.0% 63.6%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.59 51.0 4.31e-01 98.2% 57.6%
3umgA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 46.0 4.26e-01 90.9% 95.8%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3913300 3755.3.1.303 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.90 83.0 5.88e-01 100.0% 55.3%
3349325 5086.1.1.135 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 0.89 82.0 7.14e-01 100.0% 68.8%
4621241 304.58.1.0 a+b two layers › Alpha-beta plaits › FepE-like › FepE-like 0.88 82.0 5.31e-01 100.0% 26.0%
3504421 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.88 81.0 5.22e-01 100.0% 25.3%
3414779 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.88 81.0 5.03e-01 100.0% 21.5%
4596937 605.1.1.247 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PCRF 0.87 80.0 6.44e-01 100.0% 69.0%
3739245 4177.1.1.14 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_2 0.87 80.0 5.22e-01 100.0% 26.0%
3737139 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.87 80.0 4.89e-01 100.0% 20.0%
4675002 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.87 76.0 5.61e-01 94.5% 40.0%
3564230 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.87 79.0 4.90e-01 100.0% 20.4%
4018888 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.86 79.0 4.63e-01 100.0% 14.4%
3949413 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.86 77.0 5.70e-01 100.0% 88.1%
3791628 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.85 77.0 5.58e-01 100.0% 37.9%
3395959 5086.1.1.166 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PEX11 0.85 76.0 6.30e-01 100.0% 60.0%
3318812 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.85 76.0 5.48e-01 100.0% 94.0%
3689697 605.4.1.8 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › MARVEL 0.85 72.0 6.09e-01 94.5% 58.9%
3577937 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.84 75.0 5.85e-01 100.0% 50.4%
4457403 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.84 76.0 4.75e-01 100.0% 94.4%
3462288 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.84 77.0 6.43e-01 100.0% 63.3%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.83 74.0 5.37e-01 100.0% 50.7%
3944950 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.83 74.0 7.04e-01 100.0% 95.4%
3636681 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.83 74.0 4.56e-01 100.0% 18.1%
4475138 606.1.1.16 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Transposase_20 0.83 74.0 4.96e-01 100.0% 28.5%
3719613 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.82 74.0 4.85e-01 100.0% 25.8%
3971315 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.82 73.0 5.89e-01 100.0% 52.4%
3385950 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.82 74.0 6.84e-01 100.0% 88.6%
3589446 2004.1.1.301 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.82 74.0 4.27e-01 100.0% 13.5%
3811563 4207.1.2.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.82 73.0 5.54e-01 100.0% 45.6%
3608485 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.81 73.0 5.67e-01 100.0% 48.7%
3800491 4177.1.1.10 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.81 71.0 4.59e-01 100.0% 26.8%
5042955 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.81 72.0 4.07e-01 100.0% 47.2%
3655688 3755.3.1.303 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.80 68.0 4.74e-01 94.5% 49.7%
5018387 604.18.1.0 alpha bundles › Spectrin repeat-like › Triple-helical domain in regulatory ATPase variant A (RavA) › Triple-helical domain in regulatory ATPase variant A (RavA) 0.80 70.0 5.66e-01 100.0% 65.7%
3930829 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.79 70.0 6.36e-01 100.0% 76.0%
3618461 632.22.1.29 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › 7tm_1 0.79 68.0 5.60e-01 100.0% 53.8%
4028894 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.79 71.0 4.07e-01 100.0% 11.0%
4946656 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.79 69.0 5.38e-01 100.0% 67.5%
3764851 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.79 63.0 5.39e-01 89.1% 93.3%
3839497 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.78 66.0 5.72e-01 94.5% 89.4%
4961508 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.78 67.0 6.12e-01 100.0% 76.0%
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.78 67.0 5.79e-01 100.0% 66.7%
3848917 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.78 64.0 5.53e-01 90.9% 100.0%
3847053 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.78 67.0 6.01e-01 94.5% 70.7%
5029880 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.77 68.0 5.69e-01 100.0% 60.0%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.77 67.0 5.67e-01 100.0% 63.2%
4028290 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.77 66.0 5.44e-01 100.0% 52.4%
4943532 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.77 65.0 6.08e-01 100.0% 94.3%
4965021 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.76 63.0 6.37e-01 94.5% 96.4%
5018636 605.1.1.3 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_2 0.76 64.0 6.05e-01 100.0% 94.3%
4998530 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.76 65.0 4.21e-01 100.0% 50.2%
4359331 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.76 65.0 6.42e-01 100.0% 93.3%
None 0.76 65.0 4.46e-01 100.0% 30.0%
3188754 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.76 66.0 3.96e-01 100.0% 51.9%
4945473 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.75 63.0 3.97e-01 100.0% 71.4%
4579811 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.75 64.0 5.28e-01 100.0% 52.4%
3246566 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.75 66.0 4.54e-01 100.0% 28.9%
3576275 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.74 64.0 4.91e-01 100.0% 51.5%
5044551 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 62.0 6.00e-01 100.0% 86.2%
3488979 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.73 63.0 4.89e-01 100.0% 46.4%
3221299 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.72 65.0 4.87e-01 100.0% 63.0%
3498924 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 59.0 4.56e-01 100.0% 98.6%
3958889 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 4.25e-01 98.2% 38.2%
3690520 192.29.1.128 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF202 0.70 59.0 4.98e-01 100.0% 56.0%
4267024 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.70 59.0 5.40e-01 100.0% 72.0%
3425142 5000.4.1.3 alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › DUF4220 0.70 62.0 3.98e-01 100.0% 21.5%
3594486 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 57.0 4.64e-01 100.0% 46.7%
4401282 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.70 57.0 4.68e-01 100.0% 59.1%
3443358 109.3.1.31 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF4220 0.67 54.0 3.52e-01 100.0% 18.9%
3589400 192.5.1.4 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 0.67 53.0 4.62e-01 100.0% 56.0%
3663990 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.66 57.0 5.35e-01 100.0% 84.3%
4008034 223.1.1.113 a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.66 54.0 3.95e-01 100.0% 31.8%
3337008 192.2.1.60 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.66 54.0 4.20e-01 100.0% 41.4%
4375086 605.1.1.108 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE 0.65 53.0 5.32e-01 92.7% 100.0%
4075864 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.65 50.0 5.03e-01 94.5% 90.9%
3231728 5001.1.1.84 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.65 52.0 3.36e-01 100.0% 18.1%
3535521 1073.1.1.11 alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › WWC1 0.63 50.0 4.73e-01 100.0% 78.7%