←Back to structures
MW560978.1__QSM00611.1__X__00035
Bact-VirMW560978.1__QSM00611.1__X__00035
Identity
- Accession:
- MW560978 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
TaxID: 2736267
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-84
Domain cluster:
rep: KF692088.2__AHB31633.1__ArV2_gp23__00023__D17-96
D2
high
residues 133-238
Domain cluster:
rep: MW960037.1__QWY83581.1__X__00027__D159-241
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.65 | 46.0 | 3.54e-01 | 79.2% | 33.6% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 40.0 | 4.45e-01 | 77.4% | 81.5% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.63 | 45.0 | 3.99e-01 | 74.5% | 94.8% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 4.70e-01 | 78.3% | 94.7% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 35.0 | 4.05e-01 | 79.2% | 81.7% |
| 4ae8D00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 45.0 | 3.91e-01 | 80.2% | 85.5% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 52.0 | 3.70e-01 | 98.1% | 93.7% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 4.54e-01 | 95.3% | 90.8% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 4.15e-01 | 74.5% | 95.5% |
| 2nujA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 45.0 | 3.98e-01 | 81.1% | 83.8% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.57 | 49.0 | 3.29e-01 | 95.3% | 38.0% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.57 | 41.0 | 3.84e-01 | 75.5% | 75.6% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.87e-01 | 74.5% | 94.2% |
| 4lmiB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.81e-01 | 77.4% | 80.1% |
| 5egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 43.0 | 3.66e-01 | 81.1% | 88.0% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.55 | 38.0 | 3.69e-01 | 80.2% | 60.8% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 42.0 | 4.34e-01 | 81.1% | 85.1% |
| 1rwhA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 47.0 | 3.58e-01 | 97.2% | 88.6% |
| 4mjdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.89e-01 | 76.4% | 96.5% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 48.0 | 3.95e-01 | 96.2% | 87.2% |
| 5o16B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 42.0 | 3.17e-01 | 84.9% | 82.4% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 48.0 | 4.40e-01 | 99.1% | 87.8% |
| 6wulB01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.52 | 47.0 | 3.29e-01 | 100.0% | 72.9% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 42.0 | 4.35e-01 | 96.2% | 93.9% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.83e-01 | 82.1% | 97.3% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.51 | 44.0 | 2.93e-01 | 97.2% | 45.7% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.50 | 40.0 | 3.97e-01 | 95.3% | 83.6% |
| 1w1wA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.59e-01 | 90.6% | 27.7% |
| 2wzoA01 | 3.30.160.360 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 39.0 | 3.63e-01 | 83.0% | 66.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178505 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.71 | 46.0 | 4.48e-01 | 90.6% | 60.0% |
| None | — | 0.70 | 39.0 | 4.69e-01 | 80.2% | 82.9% | |
| 3683807 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.69 | 40.0 | 4.19e-01 | 82.1% | 63.2% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.68 | 43.0 | 5.13e-01 | 74.5% | 97.1% |
| 3490071 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.64 | 51.0 | 3.89e-01 | 84.0% | 95.7% |
| 5019886 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.63 | 41.0 | 4.71e-01 | 76.4% | 92.0% |
| 3283509 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.62 | 42.0 | 4.20e-01 | 77.4% | 67.9% |
| 3511117 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.61 | 43.0 | 3.71e-01 | 72.6% | 53.3% |
| 4929282 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 41.0 | 4.72e-01 | 95.3% | 98.7% |
| 4032717 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.60 | 40.0 | 4.64e-01 | 72.6% | 97.3% |
| 3336275 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.58 | 35.0 | 3.78e-01 | 79.2% | 71.1% |
| 3189324 | 375.1.1.319 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Saf4_Yju2 | 0.57 | 37.0 | 4.37e-01 | 83.0% | 100.0% |
| 3187371 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.57 | 42.0 | 4.24e-01 | 77.4% | 96.2% |
| 3684112 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.57 | 51.0 | 3.60e-01 | 98.1% | 48.0% |
| 3422280 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.57 | 46.0 | 4.59e-01 | 88.7% | 96.3% |
| 3290683 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 41.0 | 3.95e-01 | 78.3% | 90.6% |
| 3941402 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 36.0 | 3.83e-01 | 75.5% | 74.4% |
| 3587998 | 243.1.1.102 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF28180 | 0.56 | 39.0 | 3.94e-01 | 71.7% | 95.2% |
| 3680814 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.56 | 47.0 | 3.33e-01 | 93.4% | 93.1% |
| 4983588 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 34.0 | 3.94e-01 | 96.2% | 86.7% |
| 3441510 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 48.0 | 3.58e-01 | 95.3% | 41.5% |
| 3650512 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 48.0 | 3.45e-01 | 94.3% | 44.9% |
| 3599742 | 5.1.5.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FG-GAP_3 | 0.54 | 45.0 | 3.10e-01 | 93.4% | 53.5% |
| 3682839 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.54 | 46.0 | 3.38e-01 | 96.2% | 45.2% |
| 3517323 | 3131.1.1.2 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN | 0.53 | 42.0 | 4.22e-01 | 84.9% | 86.4% |
| 3813090 | 9.13.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent | 0.53 | 44.0 | 3.93e-01 | 91.5% | 90.3% |
| 3480143 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.53 | 41.0 | 3.69e-01 | 84.0% | 74.7% |
| 3305683 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 46.0 | 3.22e-01 | 98.1% | 38.2% |
| 3343802 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.52 | 46.0 | 3.16e-01 | 96.2% | 29.9% |
| 3178465 | 719.1.1.8 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF29965 | 0.52 | 44.0 | 4.22e-01 | 88.7% | 95.8% |
| 3805475 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.52 | 44.0 | 3.17e-01 | 94.3% | 44.0% |
| 3740897 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.52 | 43.0 | 3.13e-01 | 94.3% | 85.1% |
| 3943330 | 213.1.1.64 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535 | 0.51 | 40.0 | 3.15e-01 | 86.8% | 38.3% |
| 3192395 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.51 | 41.0 | 4.20e-01 | 95.3% | 91.0% |
| 3643787 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 45.0 | 3.13e-01 | 97.2% | 51.3% |
| 5070420 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 36.0 | 3.33e-01 | 74.5% | 78.6% |
| 4633341 | 5.1.4.103 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DCAF17 | 0.50 | 43.0 | 2.82e-01 | 95.3% | 31.6% |
| 3172630 | 4026.1.1.2 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Bud3_N | 0.50 | 36.0 | 2.93e-01 | 77.4% | 41.1% |
D3
high
residues 256-367