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MW560978.1__QSM00632.1__X__00056
Bact-VirMW560978.1__QSM00632.1__X__00056
Identity
- Accession:
- MW560978 ↗
- Kingdom:
- phage
Quality
76.4
mean pLDDT
Taxonomy
TaxID: 2736267
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-52
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.65 | 51.0 | 3.38e-01 | 88.1% | 85.6% |
| 1cg2A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.65 | 50.0 | 3.14e-01 | 90.5% | 35.5% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.64 | 48.0 | 3.37e-01 | 85.7% | 40.4% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 49.0 | 3.51e-01 | 88.1% | 46.8% |
| 2hdlA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 51.0 | 4.32e-01 | 100.0% | 63.6% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 49.0 | 4.58e-01 | 95.2% | 78.2% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.59 | 47.0 | 3.57e-01 | 97.6% | 57.3% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 46.0 | 4.14e-01 | 100.0% | 62.1% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 43.0 | 3.65e-01 | 83.3% | 48.7% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 45.0 | 4.22e-01 | 95.2% | 75.4% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 39.0 | 3.17e-01 | 85.7% | 33.0% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 3.99e-01 | 97.6% | 72.7% |
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 44.0 | 3.43e-01 | 100.0% | 60.0% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 37.0 | 3.52e-01 | 85.7% | 55.4% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 38.0 | 3.05e-01 | 85.7% | 32.4% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 3.84e-01 | 95.2% | 85.7% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.54 | 39.0 | 3.15e-01 | 92.9% | 72.6% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.86e-01 | 97.6% | 77.4% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.73e-01 | 90.5% | 73.3% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 42.0 | 2.97e-01 | 95.2% | 52.1% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 38.0 | 3.72e-01 | 100.0% | 70.4% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 40.0 | 3.48e-01 | 95.2% | 75.9% |
| 5z0uA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 43.0 | 3.51e-01 | 100.0% | 94.4% |
| 1dz1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 37.0 | 3.42e-01 | 100.0% | 52.9% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.52 | 37.0 | 3.23e-01 | 76.2% | 47.8% |
| 4qucA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.67e-01 | 97.6% | 69.6% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 37.0 | 3.08e-01 | 85.7% | 47.3% |
| 1ihjA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 39.0 | 3.28e-01 | 100.0% | 88.3% |
| 3mtsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 37.0 | 3.51e-01 | 97.6% | 62.9% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 39.0 | 3.43e-01 | 100.0% | 66.7% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 37.0 | 3.71e-01 | 90.5% | 81.2% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.01e-01 | 97.6% | 37.8% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.24e-01 | 97.6% | 48.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048721 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.64 | 49.0 | 4.43e-01 | 90.5% | 67.7% |
| 3512071 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 49.0 | 3.00e-01 | 90.5% | 74.2% |
| 3715372 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.64 | 52.0 | 3.15e-01 | 97.6% | 18.1% |
| 4379266 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.64 | 54.0 | 3.64e-01 | 100.0% | 55.3% |
| 3223921 | 2484.1.1.259 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 | 0.64 | 52.0 | 4.25e-01 | 100.0% | 80.0% |
| 4599318 | 2.1.1.299 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 | 0.64 | 50.0 | 4.11e-01 | 88.1% | 51.2% |
| 3507580 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.63 | 49.0 | 3.21e-01 | 90.5% | 77.6% |
| 4890924 | 2004.1.1.182 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_8 | 0.63 | 51.0 | 3.38e-01 | 97.6% | 28.4% |
| 3199611 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.62 | 48.0 | 4.33e-01 | 90.5% | 65.6% |
| 3904071 | 214.1.1.11 ↗ | a+b two layers › SH2 › SH2 › SH2 › PF27628 | 0.62 | 48.0 | 3.58e-01 | 90.5% | 33.3% |
| 3995145 | 316.1.1.10 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap | 0.62 | 51.0 | 3.17e-01 | 100.0% | 62.1% |
| 3804890 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.62 | 47.0 | 4.39e-01 | 90.5% | 71.2% |
| 4486742 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.62 | 47.0 | 3.44e-01 | 92.9% | 62.1% |
| 3658860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 45.0 | 2.93e-01 | 90.5% | 16.4% |
| 3842593 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.60 | 49.0 | 3.29e-01 | 100.0% | 73.3% |
| 3352475 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.60 | 45.0 | 3.91e-01 | 90.5% | 60.0% |
| 3263635 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 49.0 | 4.36e-01 | 97.6% | 69.2% |
| 3708643 | 220.1.1.218 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26661 | 0.59 | 47.0 | 3.60e-01 | 97.6% | 61.7% |
| 3419793 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.59 | 46.0 | 3.32e-01 | 92.9% | 30.4% |
| 3598139 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 46.0 | 3.28e-01 | 95.2% | 38.7% |
| 2800345 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.58 | 47.0 | 4.26e-01 | 95.2% | 69.4% |
| 3421657 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.58 | 41.0 | 3.51e-01 | 85.7% | 94.1% |
| 3614189 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.57 | 43.0 | 2.72e-01 | 88.1% | 24.4% |
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.57 | 46.0 | 4.13e-01 | 97.6% | 81.5% |
| 3591940 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.57 | 40.0 | 2.68e-01 | 83.3% | 16.8% |
| 3216768 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 43.0 | 3.48e-01 | 95.2% | 55.2% |
| 3501107 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 42.0 | 2.97e-01 | 92.9% | 98.8% |
| 4405996 | 2011.1.1.20 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20, Peptidase_M28 | 0.55 | 42.0 | 2.69e-01 | 90.5% | 40.8% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.55 | 42.0 | 3.37e-01 | 90.5% | 60.0% |
| 3911822 | 913.1.1.0 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) | 0.54 | 37.0 | 3.49e-01 | 76.2% | 60.0% |
| 3511809 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.53 | 38.0 | 3.03e-01 | 85.7% | 33.3% |
| 3280385 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.53 | 37.0 | 3.63e-01 | 100.0% | 65.5% |
| 4929084 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 40.0 | 2.41e-01 | 92.9% | 21.0% |
| 3633647 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.53 | 42.0 | 3.79e-01 | 97.6% | 73.8% |
| 3466584 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.73e-01 | 97.6% | 69.2% |
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 38.0 | 3.01e-01 | 88.1% | 34.5% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 39.0 | 3.14e-01 | 97.6% | 52.7% |
| 4478921 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.51 | 40.0 | 3.39e-01 | 97.6% | 85.9% |