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MW570730.1__QSM00780.1__YerA41_079__00079

Bact-Vir

MW570730.1__QSM00780.1__YerA41_079__00079

Identity

Accession:
MW570730 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96
PDB
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vxvA00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.68 30.0 3.53e-01 79.8% 58.5%
2pgwA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 43.0 3.65e-01 71.3% 68.0%
2oztA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 41.0 3.80e-01 70.2% 72.9%
3op2A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 40.0 3.63e-01 71.3% 76.5%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 40.0 3.58e-01 70.2% 59.1%
3sszA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 39.0 3.50e-01 70.2% 78.2%
2dibA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 33.0 3.30e-01 100.0% 55.7%
2pkhA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.56 41.0 3.73e-01 78.7% 96.9%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 37.0 3.58e-01 71.3% 83.2%
3rpcA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 40.0 2.96e-01 81.9% 56.1%
4a2lB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.67e-01 83.0% 88.6%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.51 39.0 2.79e-01 84.0% 43.0%
2lfeA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 3.73e-01 81.9% 93.4%
2pttB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.57e-01 77.7% 92.6%
2qw7C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.50 35.0 3.53e-01 72.3% 100.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3576653 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.65 47.0 4.43e-01 76.6% 93.0%
3281114 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.64 44.0 3.91e-01 71.3% 73.6%
3591800 10.12.1.51 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 0.60 40.0 2.73e-01 81.9% 19.7%
3680747 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 46.0 2.97e-01 84.0% 18.8%
3477257 5.1.4.148 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR93 0.58 44.0 2.79e-01 83.0% 24.7%
3433747 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 45.0 3.69e-01 88.3% 73.0%
3270453 2484.1.1.120 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.56 39.0 3.43e-01 71.3% 67.9%
3211236 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 31.0 3.51e-01 84.0% 72.9%
3716955 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 30.0 3.44e-01 100.0% 72.9%
3929330 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.53 35.0 3.25e-01 84.0% 49.2%
3456246 330.1.1.19 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 0.52 35.0 3.65e-01 71.3% 81.1%
3174848 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.51 45.0 3.50e-01 98.9% 71.6%
3179728 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 39.0 2.62e-01 85.1% 20.8%
4209177 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 39.0 3.95e-01 81.9% 94.7%
4134639 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 38.0 3.79e-01 79.8% 93.0%
3707477 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 38.0 2.52e-01 84.0% 19.0%
3959126 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.50 43.0 3.60e-01 100.0% 82.2%
3869833 109.4.1.3457 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HPS3_N, HPS3_C 0.50 31.0 2.34e-01 85.1% 23.8%
3371527 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 38.0 3.53e-01 83.0% 65.3%