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MW570730.1__QSM00796.1__YerA41_095__00095
Bact-VirMW570730.1__QSM00796.1__YerA41_095__00095
Identity
- Accession:
- MW570730 ↗
- Kingdom:
- phage
Quality
68.6
mean pLDDT
Taxonomy
TaxID: 2815754
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-118
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.75 | 52.0 | 4.80e-01 | 72.6% | 96.3% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 49.0 | 4.93e-01 | 70.2% | 92.0% |
| 2cfoA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 57.0 | 5.33e-01 | 89.3% | 85.6% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.70 | 51.0 | 3.98e-01 | 76.2% | 40.4% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.68 | 50.0 | 4.03e-01 | 76.2% | 41.3% |
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.68 | 48.0 | 4.39e-01 | 75.0% | 69.6% |
| 5mlc900 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 47.0 | 4.37e-01 | 72.6% | 93.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.65 | 45.0 | 4.11e-01 | 72.6% | 91.5% |
| 2wsiA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 46.0 | 3.15e-01 | 77.4% | 21.8% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.64 | 53.0 | 5.00e-01 | 89.3% | 84.0% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 51.0 | 4.94e-01 | 85.7% | 89.2% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 4.59e-01 | 77.4% | 87.9% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 46.0 | 4.73e-01 | 96.4% | 84.6% |
| 3gwlA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.62 | 46.0 | 4.33e-01 | 79.8% | 96.2% |
| 2m6bA00 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.61 | 53.0 | 4.49e-01 | 100.0% | 94.0% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.60 | 52.0 | 3.82e-01 | 100.0% | 96.7% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.60 | 43.0 | 3.61e-01 | 77.4% | 54.8% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 44.0 | 3.40e-01 | 84.5% | 33.2% |
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.58 | 36.0 | 3.39e-01 | 96.4% | 52.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 40.0 | 4.10e-01 | 100.0% | 76.9% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 49.0 | 4.72e-01 | 94.0% | 90.8% |
| 3ezhA00 | 1.20.120.960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain | 0.57 | 51.0 | 4.61e-01 | 100.0% | 93.9% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.57 | 49.0 | 3.64e-01 | 94.0% | 86.4% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.57 | 36.0 | 4.06e-01 | 98.8% | 86.9% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 38.0 | 3.78e-01 | 98.8% | 64.8% |
| 3cbuA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 39.0 | 3.36e-01 | 71.4% | 61.9% |
| 3cwzB01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.56 | 45.0 | 3.75e-01 | 88.1% | 59.6% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 40.0 | 4.11e-01 | 76.2% | 88.6% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 36.0 | 3.39e-01 | 100.0% | 55.9% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 37.0 | 3.31e-01 | 72.6% | 68.8% |
| 4fx0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.64e-01 | 83.3% | 59.8% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.53 | 39.0 | 4.04e-01 | 94.0% | 85.0% |
| 1rrmA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.53 | 45.0 | 3.43e-01 | 94.0% | 75.0% |
| 1jfaB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 45.0 | 3.06e-01 | 97.6% | 60.0% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.53 | 44.0 | 3.79e-01 | 94.0% | 87.1% |
| 3tahA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 43.0 | 4.27e-01 | 89.3% | 98.9% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 40.0 | 3.29e-01 | 98.8% | 43.9% |
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.52 | 39.0 | 3.80e-01 | 83.3% | 87.9% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.52 | 40.0 | 4.08e-01 | 84.5% | 100.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.51 | 35.0 | 3.56e-01 | 100.0% | 72.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 38.0 | 4.04e-01 | 100.0% | 90.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971099 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.74 | 42.0 | 4.12e-01 | 100.0% | 52.2% |
| 3573846 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.73 | 65.0 | 4.59e-01 | 100.0% | 50.2% |
| 5067728 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 47.0 | 3.45e-01 | 75.0% | 39.2% |
| 4026279 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.66 | 45.0 | 4.02e-01 | 71.4% | 87.5% |
| 3396665 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.63 | 50.0 | 4.84e-01 | 85.7% | 92.6% |
| 3654456 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.62 | 55.0 | 3.78e-01 | 100.0% | 73.8% |
| 5030255 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.61 | 43.0 | 2.97e-01 | 73.8% | 61.0% |
| 3727403 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 45.0 | 3.47e-01 | 79.8% | 85.9% |
| 3442441 | 604.16.1.0 ↗ | alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain | 0.61 | 53.0 | 5.08e-01 | 96.4% | 100.0% |
| 161395 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.60 | 49.0 | 4.70e-01 | 91.7% | 94.8% |
| 3402082 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 48.0 | 4.60e-01 | 89.3% | 84.0% |
| 3403263 | 101.1.2.477 ↗ | alpha arrays › HTH › HTH › winged helix domain › MADF_DNA_bdg | 0.60 | 47.0 | 4.68e-01 | 85.7% | 92.2% |
| 4026671 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 41.0 | 3.73e-01 | 71.4% | 75.7% |
| 4192699 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.58 | 41.0 | 3.57e-01 | 73.8% | 74.6% |
| 3356672 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.58 | 43.0 | 3.83e-01 | 79.8% | 95.2% |
| 3278726 | 101.1.1.282 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF222 | 0.58 | 51.0 | 4.54e-01 | 100.0% | 88.0% |
| 3382066 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.58 | 42.0 | 3.74e-01 | 77.4% | 88.8% |
| 3441901 | 632.1.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Rx_N | 0.58 | 38.0 | 3.89e-01 | 100.0% | 70.0% |
| 4024514 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.58 | 39.0 | 3.52e-01 | 100.0% | 50.4% |
| 4317199 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.57 | 41.0 | 3.60e-01 | 75.0% | 77.6% |
| 5001604 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.57 | 50.0 | 3.83e-01 | 98.8% | 62.0% |
| 5074457 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.57 | 47.0 | 4.40e-01 | 94.0% | 77.1% |
| 3262164 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.56 | 39.0 | 2.80e-01 | 72.6% | 63.1% |
| 4134938 | 601.3.1.14 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PF27870 | 0.56 | 49.0 | 4.45e-01 | 100.0% | 97.4% |
| 5071125 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.56 | 38.0 | 3.56e-01 | 98.8% | 56.2% |
| 3580332 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.56 | 48.0 | 3.96e-01 | 97.6% | 79.4% |
| 4945390 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 39.0 | 3.35e-01 | 73.8% | 69.6% |
| 3391259 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.55 | 39.0 | 3.87e-01 | 75.0% | 83.3% |
| 3872183 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.55 | 48.0 | 3.74e-01 | 100.0% | 65.6% |
| 5074875 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.55 | 44.0 | 4.35e-01 | 91.7% | 98.9% |
| 4018713 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 44.0 | 4.00e-01 | 89.3% | 90.4% |
| 3402081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 43.0 | 4.28e-01 | 89.3% | 96.7% |
| 3197604 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.54 | 46.0 | 3.88e-01 | 100.0% | 54.4% |
| 5082904 | 3594.1.1.0 ↗ | alpha bundles › Oncogenic effector CagA domain III › Oncogenic effector CagA domain III › Oncogenic effector CagA domain III | 0.54 | 42.0 | 3.84e-01 | 85.7% | 87.0% |
| 4032073 | 604.5.1.3 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ArAE_1_C | 0.53 | 44.0 | 3.59e-01 | 94.0% | 98.2% |
| 3386718 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 46.0 | 3.80e-01 | 100.0% | 75.5% |
| 988057 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.53 | 38.0 | 4.23e-01 | 77.4% | 98.5% |
| 224060 | 3631.1.1.0 ↗ | 0.53 | 39.0 | 3.99e-01 | 92.9% | 84.8% | |
| 2555592 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.53 | 41.0 | 4.09e-01 | 100.0% | 81.2% |
| 3688308 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 41.0 | 3.12e-01 | 86.9% | 74.5% |
| 3484774 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.52 | 37.0 | 3.42e-01 | 72.6% | 84.8% |
| 3925075 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 37.0 | 4.03e-01 | 73.8% | 94.3% |
| 3395533 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 45.0 | 3.45e-01 | 100.0% | 60.5% |
| 3800597 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.51 | 44.0 | 2.79e-01 | 100.0% | 28.5% |