←Back to structures
MW570842.1__QRJ69298.1__PHIT45-1_9__00009
Bact-VirMW570842.1__QRJ69298.1__PHIT45-1_9__00009
Identity
- Accession:
- MW570842 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-109
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 50.0 | 5.08e-01 | 100.0% | 71.7% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 41.0 | 4.95e-01 | 100.0% | 92.3% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 44.0 | 4.75e-01 | 100.0% | 73.9% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 45.0 | 4.32e-01 | 100.0% | 58.4% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 44.0 | 4.52e-01 | 100.0% | 70.6% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 46.0 | 4.89e-01 | 100.0% | 83.0% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 33.0 | 3.84e-01 | 100.0% | 66.7% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 34.0 | 3.85e-01 | 78.5% | 65.8% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.64 | 55.0 | 5.71e-01 | 98.1% | 100.0% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 41.0 | 4.34e-01 | 100.0% | 76.3% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.62 | 51.0 | 5.11e-01 | 100.0% | 89.0% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 55.0 | 5.04e-01 | 100.0% | 81.9% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.57 | 51.0 | 5.05e-01 | 100.0% | 92.2% |
| 1gvzA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 45.0 | 4.34e-01 | 100.0% | 76.9% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 51.0 | 4.78e-01 | 100.0% | 81.4% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.56 | 49.0 | 4.06e-01 | 100.0% | 89.1% |
| 2freA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 46.0 | 3.79e-01 | 91.6% | 78.4% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 39.0 | 4.06e-01 | 94.4% | 79.2% |
| 5fahA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 42.0 | 4.09e-01 | 100.0% | 76.1% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 32.0 | 3.49e-01 | 79.4% | 70.9% |
| 1bdyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 40.0 | 3.83e-01 | 100.0% | 67.5% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.54 | 38.0 | 3.52e-01 | 78.5% | 56.3% |
| 3h7tB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 44.0 | 4.23e-01 | 100.0% | 78.7% |
| 1v9kA00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 32.0 | 2.54e-01 | 75.7% | 28.2% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 33.0 | 3.25e-01 | 84.1% | 56.5% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.52e-01 | 100.0% | 64.7% |
| 6a95B00 | 2.30.130.120 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.52 | 28.0 | 3.48e-01 | 97.2% | 96.4% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.52e-01 | 100.0% | 64.5% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.52e-01 | 74.8% | 72.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943844 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 48.0 | 4.99e-01 | 100.0% | 70.0% |
| 4246480 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 47.0 | 4.99e-01 | 100.0% | 74.7% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.72 | 54.0 | 6.03e-01 | 98.1% | 100.0% |
| 3976283 | 1.1.13.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF1480 | 0.71 | 49.0 | 5.58e-01 | 100.0% | 96.2% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.70 | 47.0 | 4.95e-01 | 100.0% | 76.8% |
| 3761477 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.68 | 45.0 | 4.42e-01 | 88.8% | 62.6% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.68 | 49.0 | 4.11e-01 | 100.0% | 45.0% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.65 | 46.0 | 4.99e-01 | 100.0% | 87.8% |
| 4092486 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.64 | 39.0 | 3.26e-01 | 100.0% | 35.0% |
| 4519252 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.64 | 41.0 | 4.01e-01 | 77.6% | 59.1% |
| 1291989 | 1.1.5.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ-like | 0.62 | 41.0 | 4.34e-01 | 100.0% | 76.3% |
| 4342941 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.61 | 37.0 | 4.06e-01 | 85.0% | 74.1% |
| 4620869 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.60 | 53.0 | 3.70e-01 | 98.1% | 84.4% |
| 3289833 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.58 | 54.0 | 4.81e-01 | 100.0% | 74.5% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.58 | 33.0 | 3.81e-01 | 78.5% | 81.4% |
| 5069717 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.58 | 43.0 | 3.68e-01 | 78.5% | 98.3% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.57 | 51.0 | 5.05e-01 | 100.0% | 92.2% |
| 4204477 | 1.1.5.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF27476 | 0.57 | 41.0 | 4.33e-01 | 100.0% | 85.1% |
| 3392280 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.57 | 51.0 | 3.80e-01 | 99.1% | 87.8% |
| 4028981 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.57 | 50.0 | 4.00e-01 | 99.1% | 88.6% |
| 3264859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.96e-01 | 83.2% | 74.3% |
| 3956932 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.54 | 48.0 | 3.65e-01 | 100.0% | 61.9% |
| 3971891 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 38.0 | 2.79e-01 | 72.9% | 34.8% |
| 153078 | 11.1.1.219 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5065 | 0.53 | 33.0 | 3.25e-01 | 84.1% | 56.5% |
| 3965983 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.53 | 37.0 | 2.88e-01 | 72.9% | 39.2% |
| 5069245 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.50e-01 | 85.0% | 66.4% |
| 4311950 | 387.1.1.31 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › m_DGTX_Dc1a_b_c | 0.51 | 29.0 | 3.51e-01 | 97.2% | 96.6% |