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MW578836.1__QSM01170.1__SEA_NANOSMITE_146__00126
Bact-VirMW578836.1__QSM01170.1__SEA_NANOSMITE_146__00126
Identity
- Accession:
- MW578836 ↗
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Taxonomy
TaxID: 2813164
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-108
Domain cluster:
rep: MN062708.1__QDP44661.1__SEA_NOTHINGSPECIAL_77__00076__D13-71
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 50.0 | 3.24e-01 | 100.0% | 17.5% |
| 4ds2B00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.63 | 49.0 | 3.80e-01 | 87.7% | 53.2% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 46.0 | 4.86e-01 | 90.8% | 98.2% |
| 2yz0A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 48.0 | 3.83e-01 | 90.8% | 57.2% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.58 | 48.0 | 3.91e-01 | 100.0% | 52.2% |
| 1jiwI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 50.0 | 4.31e-01 | 100.0% | 86.7% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 3.99e-01 | 100.0% | 87.0% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.57 | 47.0 | 3.95e-01 | 100.0% | 73.4% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 4.07e-01 | 100.0% | 71.6% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.75e-01 | 100.0% | 64.4% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 4.36e-01 | 100.0% | 100.0% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.56 | 43.0 | 3.88e-01 | 100.0% | 58.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.37e-01 | 100.0% | 86.2% |
| 6gitA02 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 38.0 | 2.49e-01 | 75.4% | 96.2% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 3.57e-01 | 92.3% | 64.2% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 44.0 | 4.14e-01 | 100.0% | 74.4% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 43.0 | 4.28e-01 | 100.0% | 85.3% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 46.0 | 4.05e-01 | 100.0% | 88.5% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 4.27e-01 | 92.3% | 91.9% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 4.10e-01 | 100.0% | 79.5% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.53 | 38.0 | 3.70e-01 | 75.4% | 71.8% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.15e-01 | 100.0% | 78.9% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.92e-01 | 98.5% | 85.0% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.12e-01 | 100.0% | 78.7% |
| 6ci7A01 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 45.0 | 3.79e-01 | 100.0% | 87.7% |
| 3imoC00 | 3.30.920.70 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.53 | 39.0 | 3.37e-01 | 86.2% | 48.6% |
| 3el6A00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 43.0 | 2.94e-01 | 93.8% | 76.8% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 4.03e-01 | 100.0% | 78.7% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.92e-01 | 100.0% | 87.5% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 43.0 | 3.37e-01 | 100.0% | 43.7% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 40.0 | 3.27e-01 | 87.7% | 59.1% |
| 3p8aA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 43.0 | 3.33e-01 | 100.0% | 58.7% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 33.0 | 3.61e-01 | 100.0% | 91.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.32e-01 | 89.2% | 53.0% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 41.0 | 3.61e-01 | 100.0% | 84.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3326231 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 58.0 | 3.93e-01 | 100.0% | 33.9% |
| 3793962 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.65 | 54.0 | 4.90e-01 | 95.4% | 67.8% |
| 3585538 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.65 | 54.0 | 4.72e-01 | 95.4% | 61.0% |
| 3810217 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 42.0 | 4.66e-01 | 100.0% | 90.0% |
| 3784140 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.82e-01 | 100.0% | 92.7% |
| 3536447 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.62 | 53.0 | 4.19e-01 | 100.0% | 49.7% |
| 3238955 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.61 | 49.0 | 4.64e-01 | 95.4% | 73.8% |
| 3593811 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 53.0 | 4.34e-01 | 100.0% | 92.8% |
| 3536187 | 219.1.1.41 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 | 0.61 | 51.0 | 4.11e-01 | 100.0% | 57.1% |
| 3328891 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.60 | 50.0 | 5.08e-01 | 100.0% | 95.4% |
| 3482202 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 39.0 | 4.17e-01 | 100.0% | 80.0% |
| 3744277 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.60 | 40.0 | 4.45e-01 | 100.0% | 92.0% |
| 3272573 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 50.0 | 4.83e-01 | 96.9% | 97.3% |
| 3500713 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.59 | 49.0 | 4.11e-01 | 100.0% | 67.2% |
| 3471771 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 41.0 | 4.33e-01 | 100.0% | 87.3% |
| 4025325 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 41.0 | 4.34e-01 | 76.9% | 96.4% |
| 3191165 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.56 | 45.0 | 4.16e-01 | 90.8% | 87.1% |
| 2561577 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.56 | 39.0 | 3.98e-01 | 100.0% | 77.0% |
| 3816553 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.55 | 36.0 | 3.82e-01 | 96.9% | 78.2% |
| 3849839 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.55 | 48.0 | 4.20e-01 | 100.0% | 91.0% |
| 3703442 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 46.0 | 4.29e-01 | 100.0% | 91.8% |
| 3648057 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 45.0 | 2.82e-01 | 93.8% | 33.7% |
| 3533318 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.54 | 36.0 | 3.98e-01 | 100.0% | 92.0% |
| 3397852 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.54 | 46.0 | 3.44e-01 | 100.0% | 94.4% |
| 3200493 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 35.0 | 3.74e-01 | 100.0% | 80.0% |
| 3391556 | 4.1.1.384 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st | 0.53 | 39.0 | 3.41e-01 | 100.0% | 49.5% |
| 4932286 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 42.0 | 4.12e-01 | 100.0% | 80.8% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 42.0 | 4.13e-01 | 100.0% | 84.3% |
| 478 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.52 | 42.0 | 4.03e-01 | 100.0% | 78.7% |
| 3174580 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 42.0 | 3.96e-01 | 100.0% | 75.3% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.51 | 42.0 | 4.15e-01 | 95.4% | 92.9% |
| 3385440 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.50 | 38.0 | 3.66e-01 | 95.4% | 70.0% |
| 3282745 | 1.1.12.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins | 0.50 | 44.0 | 3.62e-01 | 100.0% | 71.7% |