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MW584152.1__QSM01710.1__PROPHIGD11-1_40__00040
Bact-VirMW584152.1__QSM01710.1__PROPHIGD11-1_40__00040
Identity
- Accession:
- MW584152 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Taxonomy
TaxID: 2813237
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-115
Domain cluster:
rep: OQ417976.1__WJJ56720.1__PROPHIT461_12__00012__D20-107
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.71 | 45.0 | 5.11e-01 | 84.0% | 89.1% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 38.0 | 2.75e-01 | 90.7% | 19.9% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.64 | 40.0 | 4.63e-01 | 92.0% | 90.6% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.62 | 42.0 | 3.88e-01 | 70.7% | 69.1% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 39.0 | 3.98e-01 | 86.7% | 70.8% |
| 1vkzA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 36.0 | 3.77e-01 | 90.7% | 71.4% |
| 1ogyA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 43.0 | 2.98e-01 | 89.3% | 73.0% |
| 1qxyA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 40.0 | 2.85e-01 | 82.7% | 72.3% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.51 | 42.0 | 3.11e-01 | 92.0% | 45.0% |
| 4oyvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 36.0 | 3.01e-01 | 76.0% | 50.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3950995 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.89 | 82.0 | 7.82e-01 | 98.7% | 98.8% |
| 4965235 | 377.1.1.136 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF29291 | 0.70 | 46.0 | 5.30e-01 | 70.7% | 100.0% |
| 3955895 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.70 | 47.0 | 5.23e-01 | 70.7% | 94.5% |
| 3370659 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 45.0 | 3.57e-01 | 100.0% | 35.5% |
| 4046934 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.59 | 34.0 | 4.10e-01 | 90.7% | 93.3% |
| 3655359 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.57 | 44.0 | 3.56e-01 | 89.3% | 42.0% |
| 5071156 | 3714.1.1.1 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical | 0.55 | 43.0 | 3.26e-01 | 89.3% | 99.5% |
| 3379507 | 109.4.1.1174 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF594 | 0.54 | 43.0 | 3.15e-01 | 88.0% | 61.9% |
| 3467156 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 47.0 | 4.22e-01 | 100.0% | 74.5% |
| 3436063 | 376.1.1.50 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › DUF1644 | 0.54 | 48.0 | 3.90e-01 | 100.0% | 61.4% |
| 4937370 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.53 | 43.0 | 2.65e-01 | 98.7% | 97.4% |
| 3666346 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 45.0 | 2.92e-01 | 100.0% | 34.2% |
| 5049254 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 36.0 | 2.90e-01 | 72.0% | 93.8% |