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MW584153.1__QSM01833.1__PROPHIGD79-1_44__00044

Bact-Vir

MW584153.1__QSM01833.1__PROPHIGD79-1_44__00044

Identity

Accession:
MW584153 ↗
Kingdom:
phage

Quality

73.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mycobacterium_phage_prophi79-1

TaxID: 2813221

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-94
PDB
Domain cluster: rep: OQ709224.1__WGH22188.1__SEA_KRONUS_87__00087__D4-89
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5zc1D00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 4.67e-01 90.1% 71.4%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 40.0 3.72e-01 78.0% 49.1%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 39.0 4.51e-01 85.7% 87.3%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 36.0 4.41e-01 90.1% 96.4%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 40.0 3.79e-01 72.5% 57.0%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 45.0 3.27e-01 86.8% 46.5%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 32.0 3.85e-01 85.7% 92.7%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 47.0 3.94e-01 93.4% 84.4%
5o46A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 4.10e-01 86.8% 80.7%
3cnvA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.55 43.0 3.66e-01 85.7% 98.7%
6uioC01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 45.0 4.34e-01 91.2% 88.3%
2pgwA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 35.0 2.98e-01 70.3% 39.3%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 36.0 3.46e-01 84.6% 57.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 39.0 4.18e-01 94.5% 93.3%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.53 45.0 4.08e-01 91.2% 85.8%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 37.0 3.43e-01 71.4% 56.5%
2chrA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 37.0 3.32e-01 71.4% 54.3%
3edpA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.53 36.0 3.12e-01 71.4% 45.2%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 44.0 4.08e-01 97.8% 98.3%
3jvaA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 36.0 3.36e-01 71.4% 57.0%
3ik4B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 36.0 3.34e-01 73.6% 79.7%
3l5zA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.51 36.0 3.14e-01 72.5% 52.2%
3u9rB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 33.0 2.38e-01 82.4% 21.2%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 39.0 3.13e-01 85.7% 69.5%
3vfcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 33.0 2.91e-01 72.5% 42.3%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3680043 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 47.0 4.29e-01 81.3% 86.7%
3202298 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 44.0 3.81e-01 75.8% 55.7%
3544618 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.61 39.0 4.07e-01 98.9% 70.6%
5011023 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.60 41.0 4.38e-01 86.8% 80.0%
4947221 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.60 43.0 4.40e-01 91.2% 75.6%
5001213 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.60 43.0 3.25e-01 90.1% 32.1%
4973193 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.59 37.0 3.88e-01 86.8% 67.1%
4931303 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.59 37.0 3.86e-01 86.8% 67.1%
4967925 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.59 42.0 4.23e-01 90.1% 72.6%
4958525 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.58 43.0 4.42e-01 94.5% 82.4%
3913071 220.1.1.52 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.58 48.0 4.22e-01 92.3% 75.7%
5054892 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.57 42.0 4.31e-01 90.1% 78.9%
5072273 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.29e-01 94.5% 85.8%
4932742 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 40.0 3.68e-01 76.9% 66.7%
3517214 814.1.1.3 ↗ a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.54 45.0 3.75e-01 92.3% 98.8%
3608576 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 40.0 3.86e-01 80.2% 76.2%
3978756 3197.1.1.1 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.53 44.0 4.05e-01 91.2% 85.8%
4948942 3425.2.1.0 ↗ a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain 0.53 41.0 3.04e-01 90.1% 30.8%
5952 814.1.1.3 ↗ a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.53 43.0 3.64e-01 90.1% 98.7%
4082272 814.1.1.3 ↗ a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.53 45.0 3.75e-01 95.6% 97.0%
3797649 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 37.0 3.55e-01 81.3% 61.8%
3932593 2.1.1.179 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REV3_N 0.52 37.0 3.56e-01 80.2% 63.8%
3719680 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.52 46.0 3.98e-01 98.9% 97.2%
3398877 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.52 37.0 3.51e-01 74.7% 77.3%
3699531 220.1.1.157 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 0.52 43.0 3.88e-01 91.2% 71.5%
5055109 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.52 38.0 3.85e-01 86.8% 78.9%
1840989 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.52 34.0 3.48e-01 75.8% 69.8%
5021275 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 40.0 3.84e-01 85.7% 78.2%
3473908 220.1.1.157 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 0.52 43.0 3.57e-01 91.2% 56.4%
3499266 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 38.0 3.49e-01 79.1% 65.9%
3709124 5.1.5.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N 0.51 45.0 2.84e-01 98.9% 89.9%
5017964 220.1.1.322 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF6141 0.51 41.0 4.21e-01 93.4% 91.0%
4634997 5.1.4.17 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N 0.50 38.0 2.24e-01 82.4% 15.1%
3660107 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 35.0 3.07e-01 72.5% 73.6%