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MW584153.1__QSM01844.1__PROPHIGD79-1_55__00055
Bact-VirMW584153.1__QSM01844.1__PROPHIGD79-1_55__00055
Identity
- Accession:
- MW584153 ↗
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-68
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.73 | 48.0 | 3.42e-01 | 94.9% | 24.1% |
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.71 | 53.0 | 4.38e-01 | 83.1% | 57.1% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 57.0 | 3.62e-01 | 91.5% | 29.0% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.70 | 59.0 | 5.00e-01 | 100.0% | 60.2% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 60.0 | 4.55e-01 | 100.0% | 53.0% |
| 5dn7A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 49.0 | 3.28e-01 | 100.0% | 19.6% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 57.0 | 4.18e-01 | 100.0% | 49.7% |
| 5ko4A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.63 | 47.0 | 4.01e-01 | 81.4% | 70.3% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 48.0 | 3.87e-01 | 83.1% | 82.1% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.63 | 53.0 | 4.70e-01 | 100.0% | 65.2% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 46.0 | 3.82e-01 | 81.4% | 44.7% |
| 4didB01 | 1.20.58.450 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog | 0.63 | 55.0 | 4.46e-01 | 100.0% | 66.7% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.61 | 49.0 | 4.66e-01 | 100.0% | 87.2% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 52.0 | 4.39e-01 | 98.3% | 67.0% |
| 2zq5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 3.24e-01 | 100.0% | 32.3% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 43.0 | 3.98e-01 | 81.4% | 56.8% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.60 | 42.0 | 4.11e-01 | 74.6% | 92.2% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.60 | 47.0 | 4.30e-01 | 100.0% | 62.9% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.59 | 43.0 | 3.99e-01 | 78.0% | 64.0% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 50.0 | 3.77e-01 | 100.0% | 38.1% |
| 1w9cA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 48.0 | 3.13e-01 | 98.3% | 24.6% |
| 1zhxA02 | 1.10.287.2720 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 44.0 | 3.90e-01 | 86.4% | 56.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.58 | 47.0 | 3.97e-01 | 100.0% | 52.5% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 45.0 | 3.39e-01 | 84.7% | 63.0% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.58 | 39.0 | 3.20e-01 | 72.9% | 59.1% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 48.0 | 3.77e-01 | 100.0% | 64.5% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.57 | 48.0 | 3.92e-01 | 96.6% | 70.4% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 45.0 | 4.32e-01 | 100.0% | 74.3% |
| 3x0uB01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.57 | 48.0 | 3.21e-01 | 96.6% | 39.5% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 49.0 | 4.55e-01 | 98.3% | 88.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 47.0 | 3.63e-01 | 100.0% | 38.9% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 39.0 | 3.91e-01 | 88.1% | 70.5% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.56 | 48.0 | 4.23e-01 | 98.3% | 95.6% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.56 | 37.0 | 3.50e-01 | 71.2% | 54.4% |
| 4fcgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.54 | 38.0 | 2.50e-01 | 74.6% | 27.7% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.54 | 44.0 | 3.63e-01 | 96.6% | 57.0% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 46.0 | 3.52e-01 | 100.0% | 58.6% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 41.0 | 4.00e-01 | 100.0% | 77.3% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 45.0 | 3.79e-01 | 100.0% | 81.4% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 45.0 | 4.21e-01 | 100.0% | 78.7% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.51 | 41.0 | 2.92e-01 | 91.5% | 31.7% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 40.0 | 3.78e-01 | 86.4% | 73.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4560916 | 2002.1.1.68 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_56 | 0.73 | 60.0 | 3.62e-01 | 91.5% | 23.4% |
| 3571610 | 2002.1.1.68 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_56 | 0.72 | 60.0 | 3.54e-01 | 91.5% | 20.7% |
| 3871164 | 108.1.1.120 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF27858 | 0.71 | 55.0 | 4.30e-01 | 83.1% | 81.6% |
| 5016721 | 6132.1.1.14 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › PF29261 | 0.71 | 59.0 | 5.96e-01 | 100.0% | 96.7% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.22e-01 | 96.6% | 74.7% |
| 3928123 | 109.4.1.44 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35 | 0.68 | 55.0 | 3.21e-01 | 88.1% | 11.6% |
| 3437512 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.67 | 54.0 | 3.53e-01 | 94.9% | 19.0% |
| 3723142 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.67 | 59.0 | 5.06e-01 | 100.0% | 67.4% |
| 3913391 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.67 | 59.0 | 5.79e-01 | 100.0% | 90.8% |
| 5065021 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.67 | 50.0 | 4.00e-01 | 83.1% | 62.9% |
| 3286911 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 58.0 | 5.49e-01 | 100.0% | 88.6% |
| 3781604 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.63 | 45.0 | 3.70e-01 | 78.0% | 63.5% |
| 5037104 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.62 | 49.0 | 3.97e-01 | 91.5% | 76.8% |
| 3901758 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.62 | 46.0 | 3.47e-01 | 81.4% | 48.7% |
| 5000678 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 45.0 | 3.94e-01 | 100.0% | 50.0% |
| 3399978 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.60 | 51.0 | 3.90e-01 | 94.9% | 42.9% |
| 3494078 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 4.47e-01 | 89.8% | 83.1% |
| 4978312 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.58 | 44.0 | 4.23e-01 | 83.1% | 84.3% |
| 3930447 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.58 | 44.0 | 3.31e-01 | 83.1% | 35.0% |
| 3856583 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.58 | 44.0 | 3.87e-01 | 83.1% | 56.7% |
| 5051498 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.58 | 48.0 | 4.31e-01 | 100.0% | 70.0% |
| 4030521 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.57 | 45.0 | 4.19e-01 | 86.4% | 77.3% |
| 3269094 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.55 | 42.0 | 4.24e-01 | 88.1% | 81.7% |
| 3353941 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.55 | 42.0 | 4.11e-01 | 88.1% | 75.4% |
| 4936475 | 103.4.1.31 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF30410 | 0.55 | 39.0 | 3.86e-01 | 79.7% | 69.2% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.54 | 41.0 | 3.76e-01 | 88.1% | 62.4% |
| 4022565 | 109.4.1.435 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N | 0.54 | 45.0 | 2.63e-01 | 100.0% | 10.5% |
| 4966056 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 42.0 | 3.17e-01 | 100.0% | 89.7% |
| 3581267 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 46.0 | 3.95e-01 | 98.3% | 83.3% |
| 3648217 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 44.0 | 3.74e-01 | 98.3% | 94.0% |
| 4467027 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 2.98e-01 | 94.9% | 62.6% |
| 4034478 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.50 | 40.0 | 2.91e-01 | 100.0% | 31.9% |