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MW584153.1__QSM01871.1__PROPHIGD79-1_84__00084
Bact-VirMW584153.1__QSM01871.1__PROPHIGD79-1_84__00084
Identity
- Accession:
- MW584153 ↗
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 68-137
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.63 | 48.0 | 3.44e-01 | 82.9% | 80.0% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.62 | 41.0 | 4.08e-01 | 70.0% | 100.0% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.61 | 42.0 | 3.99e-01 | 71.4% | 90.6% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.61 | 39.0 | 3.62e-01 | 94.3% | 48.9% |
| 5yuyA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 53.0 | 4.44e-01 | 98.6% | 83.6% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 41.0 | 3.96e-01 | 72.9% | 96.4% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 51.0 | 4.62e-01 | 98.6% | 89.9% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.58 | 46.0 | 4.06e-01 | 91.4% | 70.9% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.13e-01 | 84.3% | 95.5% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.20e-01 | 84.3% | 100.0% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.16e-01 | 84.3% | 98.8% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.57 | 50.0 | 4.34e-01 | 100.0% | 64.8% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 43.0 | 4.07e-01 | 84.3% | 98.8% |
| 1ycoA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.54 | 46.0 | 3.18e-01 | 98.6% | 94.9% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 47.0 | 3.71e-01 | 100.0% | 71.1% |
| 3us4A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 41.0 | 3.72e-01 | 85.7% | 83.5% |
| 2f4lA02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 30.0 | 3.71e-01 | 88.6% | 93.0% |
| 2knoA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 40.0 | 3.54e-01 | 87.1% | 89.1% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.60e-01 | 81.4% | 67.0% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 41.0 | 3.32e-01 | 100.0% | 87.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738773 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.64 | 42.0 | 4.66e-01 | 82.9% | 87.3% |
| 5034081 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.63 | 46.0 | 3.24e-01 | 78.6% | 57.8% |
| 3970088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 42.0 | 3.88e-01 | 75.7% | 92.6% |
| 5070107 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.59 | 40.0 | 4.02e-01 | 70.0% | 100.0% |
| 4594386 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.59 | 40.0 | 3.26e-01 | 71.4% | 97.9% |
| 3587819 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 50.0 | 3.63e-01 | 97.1% | 49.3% |
| 3810945 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.58 | 39.0 | 3.19e-01 | 71.4% | 99.3% |
| 5028326 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.57 | 46.0 | 3.46e-01 | 91.4% | 64.2% |
| 3963089 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.78e-01 | 82.9% | 70.0% |
| 4944506 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 47.0 | 3.33e-01 | 92.9% | 56.5% |
| 5036063 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.56 | 45.0 | 3.44e-01 | 91.4% | 70.6% |
| 5075866 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 41.0 | 3.96e-01 | 81.4% | 100.0% |
| 4974741 | 304.125.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins | 0.55 | 41.0 | 3.95e-01 | 82.9% | 95.3% |
| 4962616 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.55 | 44.0 | 2.98e-01 | 91.4% | 47.4% |
| 3250711 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 39.0 | 3.70e-01 | 78.6% | 100.0% |
| 5042850 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.55 | 43.0 | 3.26e-01 | 91.4% | 63.6% |
| 4196335 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.54 | 40.0 | 3.23e-01 | 80.0% | 97.9% |
| 3839711 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.54 | 46.0 | 2.65e-01 | 95.7% | 13.1% |
| 4947430 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.54 | 43.0 | 3.20e-01 | 91.4% | 62.0% |
| 3482731 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 41.0 | 3.43e-01 | 87.1% | 91.9% |
| 3575298 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 42.0 | 3.64e-01 | 87.1% | 77.3% |
| 5016589 | 3325.1.1.1 ↗ | a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter | 0.53 | 44.0 | 3.86e-01 | 98.6% | 87.0% |
| 4405336 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.52 | 42.0 | 3.10e-01 | 94.3% | 58.1% |
| 5062096 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 34.0 | 2.33e-01 | 85.7% | 17.4% |
| 4648958 | 630.1.1.3 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › PF27829 | 0.51 | 38.0 | 2.99e-01 | 81.4% | 76.1% |
| 3742058 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.50 | 39.0 | 2.40e-01 | 87.1% | 16.5% |
D2
medium
residues 1-63