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MW584156.1__QST89217.1__PROPHIGD44-1_30__00029
Bact-VirMW584156.1__QST89217.1__PROPHIGD44-1_30__00029
Identity
- Accession:
- MW584156 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
TaxID: 2813265
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-79
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.69 | 51.0 | 4.02e-01 | 100.0% | 37.8% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 57.0 | 4.82e-01 | 100.0% | 73.2% |
| 2m3aA00 | 1.10.10.1900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like | 0.67 | 43.0 | 3.86e-01 | 100.0% | 46.3% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 45.0 | 3.71e-01 | 100.0% | 39.8% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.63 | 37.0 | 3.69e-01 | 95.7% | 56.2% |
| 7qv0F01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.60 | 50.0 | 4.29e-01 | 100.0% | 92.6% |
| 1qgiA01 | 3.30.386.10 | Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 | 0.59 | 50.0 | 3.58e-01 | 100.0% | 83.7% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.57 | 46.0 | 4.03e-01 | 97.8% | 59.0% |
| 6k8nA02 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.57 | 45.0 | 3.56e-01 | 97.8% | 81.5% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 38.0 | 3.43e-01 | 87.0% | 45.9% |
| 1i7dA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.56 | 45.0 | 3.44e-01 | 97.8% | 78.0% |
| 4muoA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.56 | 40.0 | 3.54e-01 | 78.3% | 68.1% |
| 4cgyA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.55 | 44.0 | 3.39e-01 | 97.8% | 76.0% |
| 2l3wA01 | 1.10.3130.20 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › Phycobilisome linker domain | 0.54 | 44.0 | 3.17e-01 | 89.1% | 39.8% |
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.53 | 42.0 | 3.29e-01 | 95.7% | 89.8% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.56e-01 | 100.0% | 97.8% |
| 3psfA05 | 1.10.10.2740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spt6, Death-like domain | 0.53 | 42.0 | 3.48e-01 | 100.0% | 79.0% |
| 1x2lA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 41.0 | 3.61e-01 | 100.0% | 65.9% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 4.25e-01 | 100.0% | 81.8% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.15e-01 | 100.0% | 77.6% |
| 1sv0D00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.51 | 43.0 | 3.66e-01 | 100.0% | 70.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4594385 | 143.2.1.1 ↗ | alpha arrays › PABP domain-like › Ribosomal protein L20 › Ribosomal protein L20 › Ribosomal_L20 | 0.76 | 62.0 | 4.67e-01 | 100.0% | 40.0% |
| 3722897 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 37.0 | 3.78e-01 | 97.8% | 57.8% |
| 5016721 | 6132.1.1.14 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › PF29261 | 0.63 | 40.0 | 3.74e-01 | 100.0% | 50.0% |
| 3789516 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.61 | 52.0 | 4.46e-01 | 100.0% | 77.2% |
| 3583807 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.60 | 49.0 | 4.35e-01 | 100.0% | 86.7% |
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.59 | 40.0 | 3.49e-01 | 97.8% | 45.3% |
| 3718521 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.56 | 46.0 | 3.45e-01 | 100.0% | 35.6% |
| 3589834 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.56 | 39.0 | 3.64e-01 | 91.3% | 56.9% |
| 4466579 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.56 | 45.0 | 3.43e-01 | 97.8% | 77.7% |
| 3222360 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.54 | 43.0 | 4.34e-01 | 93.5% | 95.6% |
| None | — | 0.53 | 42.0 | 2.60e-01 | 100.0% | 69.7% | |
| 4945681 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.51 | 38.0 | 3.69e-01 | 82.6% | 90.9% |
| 3734625 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 45.0 | 2.66e-01 | 100.0% | 13.7% |