←Back to structures

MW584157.1__QSM01995.1__PROPHIGD68-1_18__00017

Bact-Vir

MW584157.1__QSM01995.1__PROPHIGD68-1_18__00017

Identity

Accession:
MW584157 ↗
Kingdom:
phage

Quality

85.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mycobacterium_phage_prophi68-1

TaxID: 2813220

Cluster

View cluster (70 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-56
PDB
Domain cluster: rep: MK105819.1__AZB50528.1__X__00007__D47-108
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 37.4 3.50e-09 100.0% 86.3%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.80 70.0 5.91e-01 100.0% 68.4%
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.90e-01 100.0% 66.7%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 68.0 5.12e-01 100.0% 44.2%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.69 58.0 5.02e-01 100.0% 71.8%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.65 54.0 4.88e-01 100.0% 82.9%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.73e-01 85.1% 50.6%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.35e-01 100.0% 67.1%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.21e-01 100.0% 63.1%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 51.0 4.18e-01 100.0% 64.7%
1i6aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 41.0 3.21e-01 76.6% 81.5%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 51.0 4.14e-01 100.0% 62.5%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 51.0 4.10e-01 100.0% 61.1%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.41e-01 89.4% 37.7%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 50.0 4.07e-01 100.0% 69.7%
1o7fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.13e-01 89.4% 28.8%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.55 47.0 3.72e-01 100.0% 91.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.16e-01 100.0% 68.1%
1dekA02 1.10.238.70 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.52 43.0 3.31e-01 100.0% 86.9%
7op3A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 43.0 3.01e-01 100.0% 84.2%
1kgdA02 3.30.63.10 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain 0.51 42.0 3.98e-01 95.7% 80.0%
2zzzA02 3.30.63.10 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain 0.51 42.0 3.91e-01 95.7% 86.7%
8ckpA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 38.0 2.52e-01 93.6% 82.6%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.50 33.0 2.08e-01 70.2% 26.2%
1vloA01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.50 41.0 3.05e-01 97.9% 78.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952885 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.99 94.0 9.18e-01 100.0% 94.0%
2967124 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.97 90.0 7.76e-01 100.0% 68.1%
4950846 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.91 81.0 7.96e-01 100.0% 92.0%
3589130 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.90 79.0 7.54e-01 100.0% 83.6%
4974775 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 77.0 7.15e-01 100.0% 76.7%
4375315 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 75.0 7.39e-01 97.9% 90.0%
5070666 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 76.0 7.29e-01 100.0% 85.5%
5082561 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 73.0 7.24e-01 95.7% 90.0%
3960483 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.84 72.0 7.11e-01 100.0% 92.0%
3589675 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 71.0 7.00e-01 100.0% 92.0%
5027627 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 72.0 6.90e-01 100.0% 85.5%
3589467 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 71.0 5.85e-01 100.0% 54.1%
3385701 101.1.9.95 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.81 66.0 6.33e-01 100.0% 78.2%
5000254 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 70.0 6.88e-01 100.0% 94.0%
4682727 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 66.0 6.34e-01 100.0% 83.6%
1710781 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 67.0 6.40e-01 100.0% 83.9%
3284779 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 69.0 5.03e-01 100.0% 57.6%
3943951 101.1.9.45 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.78 65.0 6.00e-01 100.0% 73.8%
3284986 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.78 69.0 5.07e-01 100.0% 55.8%
3387406 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 68.0 5.25e-01 100.0% 44.8%
3589820 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 68.0 4.97e-01 100.0% 38.4%
5073620 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 65.0 5.96e-01 100.0% 81.5%
3587304 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 62.0 5.25e-01 100.0% 52.9%
4932995 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 65.0 6.39e-01 100.0% 94.0%
4031764 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 65.0 4.65e-01 100.0% 34.8%
3286117 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 63.0 4.66e-01 100.0% 36.8%
None — 0.74 65.0 5.73e-01 100.0% 92.9%
3280706 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 64.0 5.43e-01 100.0% 83.7%
4056248 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 65.0 4.62e-01 97.9% 38.5%
3286164 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 61.0 3.95e-01 100.0% 83.9%
4004621 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.38e-01 85.1% 69.1%
4297810 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.58 52.0 4.18e-01 100.0% 62.2%
3221572 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 47.0 3.08e-01 100.0% 86.3%
4306975 2003.1.5.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT 0.54 41.0 2.75e-01 89.4% 72.8%
5013332 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.39e-01 85.1% 64.3%
4953298 101.1.2.934 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.53 45.0 3.37e-01 100.0% 37.7%
3272245 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.53 41.0 2.62e-01 87.2% 38.9%
3445213 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.52 41.0 3.04e-01 93.6% 31.4%
4944138 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 42.0 3.36e-01 100.0% 94.3%
4378012 241.7.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.50 41.0 3.31e-01 100.0% 88.6%