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MW584158.1__QSM02164.1__PROPHIGD20-1_117__00117
Bact-VirMW584158.1__QSM02164.1__PROPHIGD20-1_117__00117
Identity
- Accession:
- MW584158 ↗
- Kingdom:
- phage
Quality
67.0
mean pLDDT
Taxonomy
TaxID: 2813246
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-121
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19457.5 best | DUF5994 | 85.8 | 3.10e-24 | 99.1% | 92.0% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.71 | 31.0 | 3.16e-01 | 72.6% | 40.6% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.70 | 53.0 | 5.37e-01 | 79.2% | 100.0% |
| 4v0bA00 | 3.30.720.210 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.68 | 30.0 | 3.82e-01 | 79.2% | 69.8% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.65 | 32.0 | 4.15e-01 | 79.2% | 88.9% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.64 | 53.0 | 5.07e-01 | 88.7% | 98.3% |
| 1xakA00 | 2.60.40.1550 | Mainly Beta › Sandwich › Immunoglobulin-like › SARS coronavirus X4 | 0.60 | 38.0 | 4.50e-01 | 86.8% | 98.5% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 41.0 | 4.14e-01 | 100.0% | 70.5% |
| 3e0rB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 38.0 | 3.73e-01 | 94.3% | 57.1% |
| 3ec7A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 46.0 | 4.37e-01 | 90.6% | 71.3% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.58 | 29.0 | 3.67e-01 | 100.0% | 82.8% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 37.0 | 4.28e-01 | 85.8% | 93.3% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.56 | 28.0 | 3.25e-01 | 84.0% | 65.3% |
| 1f1uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 33.0 | 2.99e-01 | 96.2% | 40.5% |
| 2fsjA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 42.0 | 3.58e-01 | 81.1% | 92.8% |
| 3oq3B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 4.29e-01 | 88.7% | 92.1% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 28.0 | 3.15e-01 | 87.7% | 61.5% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 3.57e-01 | 80.2% | 90.7% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 35.0 | 3.56e-01 | 89.6% | 65.7% |
| 1mkfA01 | 2.60.40.1330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.84e-01 | 100.0% | 99.5% |
| 1zh8A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 43.0 | 3.58e-01 | 90.6% | 50.5% |
| 3owrA00 | 2.60.40.4120 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.88e-01 | 92.5% | 69.3% |
| 2z4tA01 | 2.60.40.3010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 4.33e-01 | 84.0% | 97.8% |
| 1twuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 32.0 | 3.00e-01 | 90.6% | 47.4% |
| 6lkzC01 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.51 | 45.0 | 3.17e-01 | 100.0% | 43.9% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 38.0 | 3.97e-01 | 78.3% | 90.7% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 44.0 | 3.33e-01 | 100.0% | 70.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965498 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.75 | 58.0 | 4.07e-01 | 81.1% | 56.2% |
| 3257938 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.70 | 32.0 | 4.12e-01 | 100.0% | 75.0% |
| 4500951 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.68 | 31.0 | 4.01e-01 | 80.2% | 75.0% |
| 4494033 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.67 | 32.0 | 3.81e-01 | 81.1% | 65.7% |
| 5075316 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.67 | 31.0 | 3.78e-01 | 100.0% | 65.7% |
| 4291917 | 3739.1.1.2 ↗ | beta sandwiches › TraO N-terminal domain › TraO N-terminal domain › TraO N-terminal domain › TraK_N | 0.67 | 50.0 | 5.29e-01 | 93.4% | 87.4% |
| 4116360 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.67 | 29.0 | 3.79e-01 | 78.3% | 71.7% |
| 3967396 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.66 | 31.0 | 3.90e-01 | 82.1% | 72.3% |
| 4443386 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.66 | 30.0 | 3.90e-01 | 80.2% | 75.0% |
| 4266955 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.66 | 31.0 | 3.89e-01 | 82.1% | 72.3% |
| 4492912 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.63 | 30.0 | 3.58e-01 | 81.1% | 65.7% |
| 4164648 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.63 | 30.0 | 3.65e-01 | 83.0% | 68.6% |
| 3687406 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 40.0 | 4.36e-01 | 97.2% | 86.9% |
| 3900733 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 29.0 | 3.40e-01 | 86.8% | 67.1% |
| 3486916 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.56 | 40.0 | 4.26e-01 | 74.5% | 86.3% |
| 3241262 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 38.0 | 4.42e-01 | 86.8% | 100.0% |
| 3480350 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 27.0 | 3.30e-01 | 87.7% | 70.8% |
| 4951904 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 32.0 | 3.89e-01 | 92.5% | 92.3% |
| 5069183 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.46e-01 | 89.6% | 94.4% |
| 4024963 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.54 | 40.0 | 3.38e-01 | 78.3% | 92.6% |
| 3260528 | 2485.1.1.35 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › MRP_L53 | 0.54 | 39.0 | 3.93e-01 | 75.5% | 74.5% |
| 3996558 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 4.30e-01 | 90.6% | 96.5% |
| 4400093 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.54 | 27.0 | 3.19e-01 | 85.8% | 66.7% |
| 3581286 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 42.0 | 3.82e-01 | 82.1% | 73.4% |
| 5026074 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.38e-01 | 91.5% | 84.2% |
| 3548470 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.53 | 43.0 | 4.07e-01 | 85.8% | 91.2% |
| 4392638 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.53 | 39.0 | 4.23e-01 | 87.7% | 95.3% |
| 3993515 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.53e-01 | 81.1% | 61.6% |
| 3992014 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 4.12e-01 | 92.5% | 86.0% |
| 5082233 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.52 | 38.0 | 4.24e-01 | 85.8% | 96.5% |
| 3921885 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 42.0 | 4.12e-01 | 88.7% | 94.8% |
| 4995589 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.68e-01 | 78.3% | 77.2% |
| 3573670 | 2485.1.1.35 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › MRP_L53 | 0.52 | 39.0 | 4.09e-01 | 80.2% | 88.4% |
| 3923705 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 4.25e-01 | 89.6% | 86.4% |
| 3254444 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.51 | 40.0 | 3.36e-01 | 100.0% | 46.7% |
| 4147581 | 2003.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N | 0.51 | 45.0 | 3.72e-01 | 99.1% | 61.5% |
| 3191742 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.51 | 42.0 | 4.28e-01 | 90.6% | 95.0% |
| 5070547 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 4.27e-01 | 89.6% | 100.0% |
| 3518813 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 4.19e-01 | 84.0% | 97.9% |
| 3414497 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.51 | 43.0 | 4.37e-01 | 98.1% | 94.3% |
| 3587038 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 38.0 | 3.77e-01 | 81.1% | 98.3% |
| 3480556 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 2.38e-01 | 90.6% | 13.0% |
| 3260190 | 11.1.1.1039 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › vWA_SIBA-E | 0.50 | 42.0 | 4.19e-01 | 90.6% | 97.3% |
| 3713400 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 4.25e-01 | 86.8% | 98.9% |
| 4926813 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.50 | 37.0 | 4.10e-01 | 84.9% | 96.5% |
| 3010132 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 4.12e-01 | 98.1% | 94.6% |