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MW584160.1__QSM02336.1__PROPHIGD86-1_62__00062

Bact-Vir

MW584160.1__QSM02336.1__PROPHIGD86-1_62__00062

Identity

Accession:
MW584160 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Mycobacterium_phage_prophi86-1

TaxID: 2813222

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-93
PDB
Domain cluster: rep: OR521083.1__WNO28148.1__SEA_DIMINIMUS_45__00045__D28-101
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6v9qH01 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.62 31.0 2.71e-01 83.0% 32.3%
3glkA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.57 27.0 3.21e-01 77.3% 64.4%
2epkX01 3.30.160.230 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase 0.55 30.0 3.12e-01 83.0% 56.2%
1totA00 3.30.60.90 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Zinc finger, ZZ-type 0.51 31.0 3.53e-01 89.8% 98.1%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964347 904.1.1.55 ↗ few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PF26046 0.70 37.0 4.76e-01 87.5% 100.0%
3950995 3380.1.1.0 ↗ a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 0.67 53.0 5.38e-01 86.4% 100.0%
5060717 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.65 31.0 3.43e-01 70.5% 55.7%
5046788 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.63 41.0 3.73e-01 85.2% 48.3%
3900452 11.1.1.15 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.62 31.0 3.23e-01 70.5% 48.2%
4959094 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.59 32.0 3.95e-01 70.5% 85.5%
3743562 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.56 32.0 3.75e-01 84.1% 92.0%
3712235 6171.1.1.0 ↗ alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases 0.56 48.0 3.92e-01 96.6% 80.0%
3783286 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.55 36.0 4.09e-01 87.5% 100.0%
5041606 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 37.0 4.07e-01 84.1% 98.5%
3805835 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.53 46.0 3.34e-01 98.9% 48.7%
3337447 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.52 27.0 3.14e-01 88.6% 71.7%
3789547 859.1.1.3 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG101 0.51 37.0 3.04e-01 77.3% 65.1%
3958077 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.51 38.0 3.08e-01 78.4% 43.6%