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MW584167.1__QST89415.1__PROPHIGD43A-5_6__00005

Bact-Vir

MW584167.1__QST89415.1__PROPHIGD43A-5_6__00005

Identity

Accession:
MW584167 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mycobacterium_phage_prophiGD43A-5

TaxID: 2813264

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-109
PDB
Domain cluster: rep: KU695582.1__AMQ66906.1__PBI_MCFLY_72__00069__D5-82
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03374.20 best ANT 41.9 1.50e-10 99.0% 79.6%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.85 45.0 4.32e-01 91.8% 46.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 34.0 3.82e-01 86.7% 63.2%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 37.0 4.30e-01 90.8% 80.6%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 30.0 3.19e-01 82.7% 50.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 35.0 4.09e-01 87.8% 80.6%
2zo4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 31.0 4.01e-01 85.7% 100.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 34.0 3.90e-01 87.8% 81.7%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 29.0 3.40e-01 89.8% 73.9%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 30.0 3.31e-01 89.8% 68.4%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 39.0 3.22e-01 85.7% 85.9%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941757 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.81 73.0 6.53e-01 100.0% 72.3%
3986225 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.80 71.0 5.45e-01 100.0% 45.4%
3994447 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.63 38.0 4.33e-01 93.9% 84.3%
4981859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 35.0 4.00e-01 89.8% 81.5%
3725258 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 36.0 3.74e-01 91.8% 63.3%
4942687 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 36.0 3.88e-01 89.8% 71.2%
4963570 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.60 36.0 3.76e-01 89.8% 65.6%
4961252 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 35.0 3.72e-01 89.8% 65.2%
5024301 101.1.2.404 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF505 0.58 36.0 3.94e-01 88.8% 72.9%
4937874 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.58 32.0 3.74e-01 90.8% 78.5%
4962131 101.1.2.934 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.58 35.0 3.55e-01 89.8% 61.1%
5044288 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 34.0 3.73e-01 90.8% 72.5%
2770777 101.1.9.15 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › BHD_3 0.56 33.0 3.51e-01 91.8% 63.6%
5034431 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.56 35.0 3.12e-01 90.8% 43.6%
3651728 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 38.0 3.93e-01 98.0% 74.4%
4949793 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.56 35.0 3.18e-01 88.8% 47.7%
4947701 101.1.2.882 ↗ alpha arrays › HTH › HTH › winged helix domain › FeoA 0.56 36.0 3.57e-01 89.8% 63.0%
4931071 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.55 34.0 2.99e-01 90.8% 42.1%
2056822 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.55 40.0 4.41e-01 99.0% 98.7%
3587290 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.54 31.0 3.57e-01 87.8% 81.5%
3280481 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.54 31.0 3.41e-01 87.8% 70.7%
3587876 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.54 31.0 3.46e-01 86.7% 75.7%
4117256 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.53 41.0 3.73e-01 89.8% 61.5%
5053927 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.53 34.0 3.05e-01 98.0% 45.0%
5077087 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 34.0 3.50e-01 96.9% 67.4%
3738615 304.109.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.53 38.0 3.59e-01 88.8% 63.5%
5017852 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 35.0 3.99e-01 87.8% 92.0%
3801792 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 32.0 3.66e-01 91.8% 85.3%
5046069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 4.12e-01 98.0% 92.9%
5049506 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 34.0 3.45e-01 85.7% 69.0%