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MW584173.1__QSM03243.1__PROPHIGD102-2_41__00041
Bact-VirMW584173.1__QSM03243.1__PROPHIGD102-2_41__00041
Identity
- Accession:
- MW584173 ↗
- Kingdom:
- phage
Quality
70.7
mean pLDDT
Taxonomy
TaxID: 2813210
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-175
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.76 | 43.0 | 3.91e-01 | 85.7% | 43.5% |
| 2db0B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.73 | 43.0 | 3.35e-01 | 90.8% | 28.3% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.68 | 43.0 | 4.96e-01 | 88.2% | 88.2% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 39.0 | 4.70e-01 | 76.5% | 88.6% |
| 1b8dA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.65 | 46.0 | 4.14e-01 | 93.3% | 53.0% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.65 | 47.0 | 4.88e-01 | 100.0% | 79.6% |
| 5c9eB01 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.64 | 44.0 | 5.06e-01 | 97.5% | 97.7% |
| 1cpcA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.63 | 46.0 | 4.12e-01 | 93.3% | 54.9% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.62 | 46.0 | 3.58e-01 | 79.0% | 81.7% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.61 | 54.0 | 4.42e-01 | 95.8% | 87.4% |
| 3wkyB01 | 1.20.1370.10 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain | 0.59 | 35.0 | 3.52e-01 | 89.9% | 57.0% |
| 4yonA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 49.0 | 4.06e-01 | 93.3% | 88.4% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.58 | 41.0 | 3.89e-01 | 94.1% | 60.5% |
| 2dfkC01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.57 | 49.0 | 4.03e-01 | 94.1% | 85.8% |
| 3h2zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 40.0 | 3.53e-01 | 89.9% | 50.0% |
| 1qqfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 47.0 | 3.59e-01 | 95.0% | 39.9% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 43.0 | 4.57e-01 | 84.0% | 94.3% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 38.0 | 4.11e-01 | 89.1% | 84.3% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.54 | 41.0 | 4.17e-01 | 97.5% | 85.1% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 45.0 | 4.06e-01 | 89.1% | 90.6% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 41.0 | 3.97e-01 | 94.1% | 74.2% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.52 | 40.0 | 3.78e-01 | 88.2% | 66.0% |
| 5c4yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 4.31e-01 | 97.5% | 83.1% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 41.0 | 3.68e-01 | 88.2% | 62.0% |
| 4uyeA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 36.0 | 3.73e-01 | 90.8% | 78.0% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.51 | 44.0 | 4.00e-01 | 95.0% | 87.0% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 43.0 | 3.89e-01 | 89.9% | 94.2% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.50 | 40.0 | 4.02e-01 | 94.1% | 82.5% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.50 | 37.0 | 3.79e-01 | 88.2% | 78.3% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 37.0 | 3.45e-01 | 77.3% | 87.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616543 | 109.3.1.229 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF27576 | 0.70 | 48.0 | 4.32e-01 | 97.5% | 50.9% |
| 4567912 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.69 | 39.0 | 3.37e-01 | 92.4% | 35.7% |
| 3699854 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 50.0 | 5.15e-01 | 100.0% | 78.3% |
| 3681983 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 49.0 | 5.30e-01 | 100.0% | 89.0% |
| 3505507 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.68 | 40.0 | 4.99e-01 | 80.7% | 100.0% |
| 3742645 | 109.4.1.282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Pdc1_Ge1 | 0.67 | 53.0 | 4.85e-01 | 96.6% | 63.9% |
| 3688837 | 109.4.1.299 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ltn1_1st | 0.67 | 50.0 | 4.35e-01 | 99.2% | 51.7% |
| 3807085 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.67 | 44.0 | 5.16e-01 | 86.6% | 95.3% |
| 3797332 | 109.4.1.1449 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27576 | 0.64 | 46.0 | 4.08e-01 | 97.5% | 51.4% |
| 3895731 | 109.4.1.1387 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin, Hid1 | 0.60 | 52.0 | 3.32e-01 | 95.0% | 19.7% |
| 3272245 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.59 | 52.0 | 3.96e-01 | 95.0% | 68.1% |
| 3675605 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.59 | 52.0 | 4.09e-01 | 97.5% | 68.1% |
| 3770345 | 602.2.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › RNA-binding protein She2p › RNA-binding protein She2p › PPP1R21_helical | 0.59 | 49.0 | 3.85e-01 | 88.2% | 91.0% |
| 3556381 | 3755.3.1.530 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PPP1R21_helical | 0.58 | 48.0 | 3.73e-01 | 88.2% | 85.8% |
| 3246380 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.57 | 35.0 | 3.40e-01 | 88.2% | 54.6% |
| 3246911 | 601.1.2.49 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PPP1R21_helical | 0.56 | 46.0 | 3.80e-01 | 87.4% | 87.0% |
| 3287135 | 6164.1.1.2 ↗ | alpha bundles › Bestrophin › Bestrophin › Bestrophin › DUF4239 | 0.56 | 45.0 | 3.56e-01 | 86.6% | 73.2% |
| 3397525 | 109.2.1.24 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › TED_complement | 0.56 | 48.0 | 3.50e-01 | 95.0% | 33.9% |
| 3606297 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 50.0 | 4.07e-01 | 100.0% | 70.6% |
| 3941318 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 43.0 | 4.14e-01 | 99.2% | 70.7% |
| 3607534 | 109.4.1.121 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mo25 | 0.55 | 46.0 | 3.21e-01 | 97.5% | 28.1% |
| 4292749 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.54 | 49.0 | 3.67e-01 | 100.0% | 89.3% |
| 3282593 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.54 | 48.0 | 3.84e-01 | 98.3% | 76.2% |
| 4213065 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 44.0 | 4.01e-01 | 88.2% | 68.8% |
| 3995562 | 602.2.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › RNA-binding protein She2p › RNA-binding protein She2p | 0.53 | 43.0 | 3.45e-01 | 88.2% | 81.2% |
| 1291622 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.53 | 44.0 | 4.06e-01 | 92.4% | 84.4% |
| 3609409 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 3.41e-01 | 98.3% | 41.8% |
| 3258252 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.52 | 37.0 | 3.76e-01 | 90.8% | 74.8% |
| 3236033 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.51 | 36.0 | 3.41e-01 | 90.8% | 60.0% |
| 3622303 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.51 | 40.0 | 4.00e-01 | 93.3% | 81.6% |
| 3270445 | 633.21.1.22 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › COPI_assoc | 0.50 | 40.0 | 4.10e-01 | 95.0% | 88.7% |