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MW584177.1__QST89608.1__PROPHIGD62-3_14__00013
Bact-VirMW584177.1__QST89608.1__PROPHIGD62-3_14__00013
Identity
- Accession:
- MW584177 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-145
Domain cluster:
rep: IMGVR_UViG_3300033990_000272-3300033990-Ga0373184_0008483_4516_5451__D198-306
D2
high
residues 162-222
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 53.0 | 3.48e-01 | 85.2% | 18.6% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 47.0 | 3.95e-01 | 75.4% | 53.3% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.65 | 44.0 | 4.20e-01 | 72.1% | 64.9% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.62 | 34.0 | 3.93e-01 | 70.5% | 74.4% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 43.0 | 3.82e-01 | 73.8% | 66.0% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.61 | 39.0 | 3.99e-01 | 75.4% | 67.2% |
| 2gw6A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 46.0 | 3.82e-01 | 86.9% | 47.4% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 48.0 | 3.14e-01 | 91.8% | 81.1% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.59 | 47.0 | 3.26e-01 | 95.1% | 73.9% |
| 2bkkA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 39.0 | 3.47e-01 | 77.0% | 47.8% |
| 1kw3B02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 39.0 | 3.01e-01 | 73.8% | 31.8% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 42.0 | 3.35e-01 | 85.2% | 46.9% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.56 | 44.0 | 3.38e-01 | 90.2% | 37.3% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.56 | 42.0 | 3.52e-01 | 82.0% | 68.8% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 3.02e-01 | 98.4% | 82.9% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 42.0 | 2.54e-01 | 86.9% | 23.9% |
| 3f3fD01 | 2.20.25.500 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 40.0 | 4.25e-01 | 78.7% | 94.1% |
| 7b1xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 46.0 | 3.00e-01 | 93.4% | 93.6% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.55 | 45.0 | 2.91e-01 | 91.8% | 22.9% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.55 | 41.0 | 3.59e-01 | 80.3% | 53.1% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 39.0 | 3.24e-01 | 78.7% | 81.6% |
| 4ntcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 3.41e-01 | 85.2% | 87.9% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.55 | 39.0 | 3.37e-01 | 78.7% | 72.0% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 2.85e-01 | 78.7% | 30.7% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 34.0 | 2.84e-01 | 80.3% | 32.5% |
| 1b7yA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 47.0 | 3.08e-01 | 98.4% | 55.1% |
| 2l2fA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.53 | 44.0 | 3.78e-01 | 98.4% | 86.1% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.53 | 38.0 | 3.27e-01 | 78.7% | 58.7% |
| 4c3sA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 39.0 | 2.71e-01 | 85.2% | 95.2% |
| 1wguA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.20e-01 | 80.3% | 84.3% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.81e-01 | 93.4% | 93.1% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 35.0 | 3.12e-01 | 73.8% | 46.4% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.51 | 42.0 | 3.54e-01 | 96.7% | 51.8% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.51 | 41.0 | 3.31e-01 | 100.0% | 93.2% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5037344 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 54.0 | 4.34e-01 | 85.2% | 40.0% |
| 5070586 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.72 | 52.0 | 4.19e-01 | 85.2% | 38.4% |
| 4606701 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.70 | 52.0 | 3.27e-01 | 82.0% | 16.6% |
| 4159891 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.68 | 52.0 | 3.22e-01 | 83.6% | 16.1% |
| 3782891 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.66 | 49.0 | 3.08e-01 | 82.0% | 16.9% |
| 4096140 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.66 | 50.0 | 3.99e-01 | 85.2% | 40.8% |
| 3716610 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 45.0 | 3.88e-01 | 77.0% | 82.0% |
| 4387507 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 42.0 | 3.88e-01 | 75.4% | 85.9% |
| 4945424 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 44.0 | 3.58e-01 | 82.0% | 97.7% |
| 3276714 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 45.0 | 3.48e-01 | 85.2% | 97.3% |
| 3589839 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.58 | 48.0 | 3.06e-01 | 95.1% | 91.0% |
| 4997106 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 43.0 | 3.59e-01 | 82.0% | 44.3% |
| 3248853 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.57 | 42.0 | 2.76e-01 | 80.3% | 24.0% |
| 4937869 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.57 | 41.0 | 3.79e-01 | 80.3% | 74.1% |
| 5027304 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.57 | 42.0 | 3.08e-01 | 80.3% | 48.6% |
| 4318516 | 243.1.1.92 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26366 | 0.56 | 44.0 | 3.58e-01 | 96.7% | 71.7% |
| 3974035 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.55 | 44.0 | 2.96e-01 | 91.8% | 79.3% |
| 3957486 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.55 | 44.0 | 3.62e-01 | 90.2% | 76.7% |
| 3280926 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.55 | 40.0 | 3.00e-01 | 80.3% | 31.0% |
| 3928406 | 2485.1.1.133 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26968, PF26976 | 0.54 | 42.0 | 2.69e-01 | 85.2% | 40.6% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.54 | 40.0 | 2.88e-01 | 80.3% | 43.2% |
| 5047469 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 44.0 | 3.62e-01 | 100.0% | 79.2% |
| 4939716 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.53 | 42.0 | 3.33e-01 | 96.7% | 39.3% |
| 3873823 | 316.1.1.16 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DZF_N | 0.53 | 42.0 | 3.06e-01 | 96.7% | 67.6% |
| 5040564 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.52 | 38.0 | 2.77e-01 | 78.7% | 74.6% |
| 3374197 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 42.0 | 2.33e-01 | 91.8% | 6.3% |
| None | — | 0.52 | 40.0 | 2.73e-01 | 93.4% | 98.4% | |
| 4603150 | 316.1.1.26 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SMODS | 0.51 | 41.0 | 3.05e-01 | 96.7% | 63.7% |
| 4598415 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.51 | 37.0 | 2.67e-01 | 78.7% | 42.5% |