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MW584183.1__QST89819.1__PROPHIGD53-3_16__00015
Bact-VirMW584183.1__QST89819.1__PROPHIGD53-3_16__00015
Identity
- Accession:
- MW584183 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Taxonomy
TaxID: 2813268
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-83
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.85 | 64.0 | 4.05e-01 | 82.7% | 18.1% |
| 1pz1A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.75 | 54.0 | 3.28e-01 | 76.9% | 13.0% |
| 3hdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 59.0 | 4.01e-01 | 84.6% | 33.9% |
| 6v3zA00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.74 | 53.0 | 3.57e-01 | 84.6% | 21.9% |
| 2o35A00 | 1.10.3340.10 | Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like | 0.67 | 49.0 | 4.20e-01 | 84.6% | 50.6% |
| 1vqrD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.66 | 51.0 | 3.28e-01 | 86.5% | 17.7% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.65 | 48.0 | 3.60e-01 | 78.8% | 35.2% |
| 1gu2A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.63 | 45.0 | 3.38e-01 | 75.0% | 37.1% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 46.0 | 3.54e-01 | 82.7% | 36.0% |
| 3m1tA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 49.0 | 3.11e-01 | 86.5% | 36.8% |
| 4inoA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 39.0 | 2.77e-01 | 73.1% | 50.0% |
| 6k8nA02 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.53 | 36.0 | 2.81e-01 | 71.2% | 58.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949667 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.80 | 60.0 | 3.58e-01 | 78.8% | 13.8% |
| 5055460 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.79 | 59.0 | 3.64e-01 | 78.8% | 28.5% |
| 5031795 | 109.3.1.483 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF2070 | 0.79 | 66.0 | 4.18e-01 | 92.3% | 19.7% |
| 3936188 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.78 | 60.0 | 3.40e-01 | 80.8% | 7.9% |
| 3661394 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 58.0 | 4.02e-01 | 82.7% | 34.1% |
| 4259834 | 563.1.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.74 | 61.0 | 4.55e-01 | 96.2% | 34.5% |
| 3420661 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.72 | 61.0 | 5.16e-01 | 92.3% | 74.1% |
| 3758587 | 7015.1.1.6 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › AGMP_C | 0.70 | 47.0 | 3.23e-01 | 71.2% | 22.3% |
| 4797 | 131.1.1.7 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HDOD | 0.67 | 51.0 | 3.23e-01 | 86.5% | 15.5% |
| 3250198 | 604.1.1.119 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › ORMDL | 0.67 | 46.0 | 3.70e-01 | 73.1% | 40.0% |
| 5033911 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.65 | 55.0 | 3.38e-01 | 94.2% | 61.3% |
| 3795532 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.59 | 46.0 | 3.60e-01 | 88.5% | 44.2% |