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MW584188.1__QSM03875.1__PROPHIGD91-2_18__00018
Bact-VirMW584188.1__QSM03875.1__PROPHIGD91-2_18__00018
Identity
- Accession:
- MW584188 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
TaxID: 2813273
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-73
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 54.0 | 5.17e-01 | 85.9% | 74.7% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.68 | 53.0 | 5.21e-01 | 85.9% | 84.6% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 46.0 | 4.59e-01 | 90.1% | 73.3% |
| 2jgdB02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.63 | 48.0 | 3.06e-01 | 80.3% | 85.1% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.62 | 50.0 | 4.59e-01 | 93.0% | 67.0% |
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.62 | 49.0 | 4.49e-01 | 90.1% | 95.9% |
| 6hrdA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 3.58e-01 | 87.3% | 40.8% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 4.48e-01 | 85.9% | 83.3% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 4.59e-01 | 90.1% | 100.0% |
| 3cf6E03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.59 | 50.0 | 4.05e-01 | 97.2% | 49.6% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.57 | 41.0 | 3.88e-01 | 77.5% | 73.3% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.56 | 40.0 | 4.25e-01 | 77.5% | 100.0% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.88e-01 | 91.5% | 94.4% |
| 3mhsB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.51 | 35.0 | 3.26e-01 | 71.8% | 91.2% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 40.0 | 3.93e-01 | 88.7% | 88.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3841169 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.75 | 54.0 | 4.15e-01 | 85.9% | 34.8% |
| 3593388 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 57.0 | 3.60e-01 | 91.5% | 18.6% |
| 3783499 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.69 | 51.0 | 4.06e-01 | 85.9% | 38.0% |
| 3601478 | 3978.1.1.0 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase | 0.68 | 48.0 | 3.12e-01 | 74.6% | 16.8% |
| 4670167 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.66 | 49.0 | 4.22e-01 | 78.9% | 56.4% |
| 4572664 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.65 | 44.0 | 4.44e-01 | 91.5% | 70.0% |
| 4000385 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.65 | 52.0 | 3.51e-01 | 94.4% | 23.0% |
| 3197399 | 109.4.1.414 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N | 0.63 | 48.0 | 2.95e-01 | 88.7% | 11.9% |
| 3016251 | 532.2.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ | 0.62 | 44.0 | 4.30e-01 | 78.9% | 67.1% |
| 3789371 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.53 | 37.0 | 3.74e-01 | 70.4% | 91.4% |