Back to structures

MW584188.1__QSM03911.1__PROPHIGD91-2_58__00058

Bact-Vir

MW584188.1__QSM03911.1__PROPHIGD91-2_58__00058

Identity

Accession:
MW584188 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-92
PDB
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.73 52.0 5.59e-01 75.9% 89.9%
2zy2A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 51.0 4.17e-01 81.9% 71.9%
2dr1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 49.0 4.22e-01 81.9% 72.6%
2vycA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 47.0 3.66e-01 80.7% 82.6%
1qz9A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 50.0 4.23e-01 89.2% 97.9%
3i9v700 3.30.920.80 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 0.62 46.0 4.11e-01 81.9% 93.7%
3x29A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.61 48.0 3.81e-01 84.3% 72.9%
4obuA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.60 44.0 3.31e-01 80.7% 44.4%
1cw1A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.60 45.0 2.87e-01 79.5% 24.1%
2gb3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 46.0 3.80e-01 84.3% 80.6%
2kfpA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.59 45.0 3.95e-01 81.9% 97.6%
2x5dA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 45.0 3.92e-01 83.1% 76.6%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 46.0 3.31e-01 89.2% 94.8%
4r2fA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 45.0 3.51e-01 89.2% 75.4%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 39.0 3.68e-01 74.7% 96.1%
6u1oA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 40.0 3.70e-01 78.3% 97.2%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 34.0 3.04e-01 81.9% 44.3%
1xxmC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.54 40.0 4.20e-01 79.5% 90.5%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 38.0 3.54e-01 77.1% 95.6%
2izvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 38.0 3.15e-01 77.1% 67.5%
2vifA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 37.0 3.29e-01 73.5% 94.4%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 40.0 2.80e-01 84.3% 63.4%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 38.0 3.32e-01 78.3% 60.6%
1dl5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 37.0 2.90e-01 77.1% 50.2%
4zglD00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.51 38.0 3.55e-01 79.5% 90.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966352 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.81 69.0 7.27e-01 94.0% 100.0%
5027607 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.72 55.0 5.75e-01 80.7% 92.0%
4999507 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.68 49.0 5.27e-01 75.9% 92.9%
3734499 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.67 57.0 5.32e-01 95.2% 94.2%
4965852 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.67 50.0 5.16e-01 81.9% 83.7%
5041795 101.25.1.0 alpha arrays › HTH › CofE insertion domain › CofE insertion domain 0.62 41.0 4.55e-01 83.1% 87.7%
3332764 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.61 44.0 4.37e-01 75.9% 77.6%
3216991 331.15.1.0 a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 0.60 43.0 4.27e-01 75.9% 87.8%
5032062 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.59 46.0 3.60e-01 84.3% 62.8%
4106961 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 43.0 3.35e-01 79.5% 56.4%
3740252 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.59 42.0 3.82e-01 75.9% 87.0%
4929294 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 51.0 4.03e-01 100.0% 97.2%
3685449 192.29.1.23 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF6536 0.58 50.0 3.86e-01 98.8% 81.5%
3578125 3016.1.1.4 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Pyridoxal_deC 0.57 42.0 3.70e-01 80.7% 73.8%
5059362 4271.1.1.3 alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N 0.57 49.0 3.66e-01 100.0% 87.4%
3619347 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.54e-01 74.7% 89.6%
3601739 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 47.0 3.29e-01 96.4% 30.0%
3935357 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.24e-01 98.8% 48.3%
3874485 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.53 38.0 3.20e-01 74.7% 91.7%
4026242 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 34.0 3.56e-01 77.1% 73.3%
3479035 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 39.0 3.07e-01 80.7% 68.0%
3871935 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 37.0 3.32e-01 80.7% 94.0%
3716680 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.51 36.0 3.27e-01 77.1% 80.0%