←Back to structures

MW584190.1__QSM04057.1__PROPHIGD03_1_4__00004

Bact-Vir

MW584190.1__QSM04057.1__PROPHIGD03_1_4__00004

Identity

Accession:
MW584190 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mycoabscvirus› Mycobacterium_phage_prophiGD03-1

TaxID: 2813229

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-77
PDB
Domain cluster: rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00219__D12-82
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 best HTH_31 43.9 3.40e-11 80.0% 87.5%
PF01381.29 HTH_3 28.6 1.70e-06 70.7% 87.3%
D2 high residues 92-240
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17765.8 best MLTR_LBD 49.5 7.60e-13 99.3% 80.4%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pxpA02 3.30.450.180 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.83 75.0 6.70e-01 94.6% 77.9%
4i5sA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 47.0 5.66e-01 94.6% 98.0%
5hwtB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 52.0 5.65e-01 98.0% 89.3%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 49.0 5.60e-01 94.0% 95.4%
6kjuB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 49.0 5.51e-01 94.6% 90.6%
4mn5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 45.0 5.29e-01 100.0% 93.2%
4hoiB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 50.0 5.66e-01 98.0% 96.5%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 41.0 4.64e-01 94.6% 76.3%
2gj3A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 47.0 5.22e-01 94.6% 86.6%
2z6cA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 48.0 5.31e-01 95.3% 88.4%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 47.0 5.43e-01 100.0% 97.2%
4r3aA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 48.0 4.53e-01 95.3% 60.8%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 45.0 5.10e-01 94.6% 87.7%
3mxqC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 48.0 5.18e-01 97.3% 86.4%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 43.0 4.91e-01 94.6% 86.5%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 47.0 4.41e-01 94.6% 60.2%
3ewkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 44.0 5.24e-01 92.6% 97.1%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 46.0 5.05e-01 94.6% 88.2%
5svgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 49.0 5.36e-01 94.6% 94.2%
4jgpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 38.0 4.61e-01 97.3% 85.9%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 45.0 4.93e-01 94.6% 85.8%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 45.0 4.94e-01 96.0% 86.1%
3luqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 44.0 4.98e-01 94.6% 89.5%
3b33A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 43.0 4.96e-01 95.3% 91.7%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 42.0 4.35e-01 95.3% 71.0%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 43.0 4.55e-01 95.3% 77.6%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 35.0 4.48e-01 95.3% 100.0%
4hh2B03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 41.0 4.89e-01 94.0% 100.0%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 41.0 4.25e-01 94.6% 76.1%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.55 28.0 3.05e-01 95.3% 54.6%
3c8cB02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 4.42e-01 100.0% 100.0%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 29.0 3.42e-01 80.5% 75.2%
4exoA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 43.0 4.41e-01 100.0% 89.0%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 30.0 3.72e-01 100.0% 90.4%
4fg9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 27.0 3.73e-01 94.6% 97.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 28.0 3.57e-01 93.3% 97.3%
5hesA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 26.0 3.51e-01 96.0% 93.8%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281720 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.87 78.0 7.80e-01 95.3% 93.3%
3947348 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.86 78.0 7.52e-01 94.6% 86.7%
3277941 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.85 76.0 7.45e-01 94.6% 87.5%
3280801 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.85 77.0 7.23e-01 95.3% 82.3%
3281547 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.85 77.0 7.24e-01 95.3% 81.7%
3283803 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.84 76.0 7.13e-01 95.3% 82.3%
3279920 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.83 74.0 6.96e-01 95.3% 80.0%
3285267 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.83 73.0 6.90e-01 94.6% 79.4%
3285699 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.83 74.0 6.98e-01 95.3% 80.6%
3288697 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.82 74.0 6.94e-01 95.3% 80.6%
3941695 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.81 73.0 6.97e-01 95.3% 85.3%
4961959 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.78 47.0 5.48e-01 94.6% 81.8%
3283751 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.78 69.0 6.55e-01 95.3% 82.9%
4962837 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.77 46.0 5.34e-01 94.6% 80.9%
3285873 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.76 69.0 6.44e-01 95.3% 80.6%
5046056 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.75 53.0 5.57e-01 95.3% 79.3%
4962734 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.75 53.0 6.12e-01 94.6% 98.2%
4965247 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.74 50.0 5.45e-01 95.3% 81.6%
4008773 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.73 50.0 5.90e-01 96.0% 100.0%
4939382 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.73 50.0 5.73e-01 94.6% 95.5%
5041424 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.72 46.0 5.38e-01 95.3% 90.5%
5006452 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.72 49.0 5.45e-01 94.6% 85.8%
5044941 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.72 49.0 5.72e-01 94.6% 97.1%
5050353 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.72 50.0 5.21e-01 94.6% 77.0%
4366032 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.71 51.0 3.82e-01 97.3% 31.9%
3588721 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.71 47.0 5.28e-01 94.6% 86.1%
4946010 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 48.0 5.51e-01 95.3% 92.7%
5053323 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.71 47.0 5.28e-01 94.6% 87.0%
4986810 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.70 45.0 4.99e-01 94.6% 80.0%
4930506 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.69 46.0 5.25e-01 94.6% 90.0%
3223498 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.68 47.0 5.04e-01 96.6% 80.8%
4931355 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.68 46.0 5.33e-01 95.3% 93.6%
5051876 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.68 46.0 4.99e-01 94.6% 81.6%
4931487 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.68 46.0 4.95e-01 96.0% 81.6%
4962860 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.68 48.0 5.32e-01 94.6% 90.8%
4949896 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.67 44.0 4.82e-01 95.3% 79.2%
3277662 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.67 48.0 5.46e-01 96.0% 99.1%
4988723 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.67 45.0 5.06e-01 94.6% 87.8%
5021977 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.67 49.0 5.53e-01 94.6% 98.3%
4989230 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.67 45.0 4.62e-01 95.3% 70.3%
4950250 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.67 49.0 5.20e-01 94.6% 86.2%
4402977 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.66 47.0 4.64e-01 95.3% 67.5%
4952182 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.66 44.0 5.01e-01 94.6% 91.8%
2855565 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 37.0 4.61e-01 98.0% 91.1%
5033693 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.65 47.0 4.92e-01 97.3% 81.5%
4938889 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.65 44.0 4.67e-01 95.3% 78.5%
3618860 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.64 47.0 4.85e-01 96.0% 80.0%
3994576 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.64 45.0 4.97e-01 98.0% 90.0%
3625374 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.64 45.0 4.98e-01 100.0% 90.0%
3234327 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.64 46.0 4.44e-01 96.0% 66.1%
3340753 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 34.0 4.30e-01 100.0% 96.5%
4944741 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 38.0 3.98e-01 95.3% 69.3%
3832396 375.1.1.134 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Cys_rich_CPXG 0.59 32.0 4.22e-01 96.6% 98.8%
3598291 60.1.2.0 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain 0.58 32.0 2.45e-01 100.0% 23.3%
3439826 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 37.0 3.70e-01 100.0% 68.7%
4355722 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 28.0 3.38e-01 88.6% 77.9%
4321941 223.1.1.83 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_13 0.52 46.0 3.79e-01 95.3% 80.2%