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MW584195.1__QSM04148.1__PROPHIGD51-2_10__00010
Bact-VirMW584195.1__QSM04148.1__PROPHIGD51-2_10__00010
Identity
- Accession:
- MW584195 ↗
- Kingdom:
- phage
Quality
62.8
mean pLDDT
Taxonomy
TaxID: 2813267
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75_130-145
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rniA01 | 3.30.720.160 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Bifunctional DNA primase/polymerase, N-terminal | 0.76 | 54.0 | 6.03e-01 | 73.6% | 100.0% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 48.0 | 4.21e-01 | 72.5% | 70.7% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 37.0 | 3.43e-01 | 79.1% | 42.1% |
| 3cuqC01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.67 | 35.0 | 3.44e-01 | 94.5% | 46.9% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.59 | 44.0 | 4.22e-01 | 79.1% | 98.1% |
| 4ipuA00 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.59 | 43.0 | 3.75e-01 | 96.7% | 50.4% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 41.0 | 3.93e-01 | 74.7% | 86.2% |
| 2qybA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 47.0 | 4.01e-01 | 89.0% | 96.7% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 41.0 | 3.75e-01 | 74.7% | 86.7% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 32.0 | 2.50e-01 | 87.9% | 27.6% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.52e-01 | 80.2% | 93.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7174 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.80 | 62.0 | 4.63e-01 | 81.3% | 72.4% |
| 4959587 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.74 | 57.0 | 4.58e-01 | 81.3% | 82.4% |
| 4112209 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.64 | 56.0 | 5.05e-01 | 94.5% | 75.8% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.58 | 42.0 | 3.20e-01 | 74.7% | 47.9% |
| 5065024 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.57 | 44.0 | 3.25e-01 | 82.4% | 71.2% |
| 3489607 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.57 | 50.0 | 3.79e-01 | 95.6% | 88.8% |
| 3220742 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 51.0 | 4.09e-01 | 97.8% | 99.4% |
| 4816097 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.57 | 47.0 | 4.24e-01 | 87.9% | 76.2% |
| 3995629 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 47.0 | 3.80e-01 | 93.4% | 98.9% |
| 3600178 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 46.0 | 3.65e-01 | 93.4% | 94.2% |
| 2895924 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.54 | 46.0 | 3.27e-01 | 95.6% | 46.2% |
| 4981896 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 44.0 | 3.82e-01 | 87.9% | 88.9% |
| 3938245 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.53 | 37.0 | 2.79e-01 | 72.5% | 37.9% |
| 3252653 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.50 | 35.0 | 3.60e-01 | 73.6% | 95.6% |
| 3321578 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.50 | 40.0 | 3.08e-01 | 89.0% | 58.7% |
D2
medium
residues 76-129_146-195