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MW584197.1__QSM04361.1__PROPHIGD43A-4_49__00049
Bact-VirMW584197.1__QSM04361.1__PROPHIGD43A-4_49__00049
Identity
- Accession:
- MW584197 ↗
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Taxonomy
TaxID: 2813263
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-86
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 47.0 | 4.08e-01 | 100.0% | 50.6% |
| 8f4rA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.62 | 45.0 | 3.88e-01 | 84.6% | 100.0% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.62 | 50.0 | 3.87e-01 | 100.0% | 41.7% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.60 | 50.0 | 3.68e-01 | 96.2% | 87.7% |
| 7uzsX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.02e-01 | 100.0% | 52.2% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 43.0 | 3.36e-01 | 100.0% | 32.6% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 49.0 | 3.74e-01 | 98.1% | 60.3% |
| 7bv5D01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 47.0 | 3.52e-01 | 98.1% | 47.9% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 42.0 | 3.73e-01 | 100.0% | 50.6% |
| 3lgdA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 46.0 | 2.76e-01 | 98.1% | 78.2% |
| 1v6eA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 40.0 | 3.62e-01 | 96.2% | 50.0% |
| 3fedA02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.57 | 47.0 | 3.19e-01 | 96.2% | 100.0% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.44e-01 | 80.8% | 45.5% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 46.0 | 3.57e-01 | 94.2% | 43.3% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 39.0 | 2.85e-01 | 73.1% | 97.4% |
| 1t9mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 2.95e-01 | 84.6% | 98.0% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.90e-01 | 98.1% | 54.7% |
| 3bgaA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.81e-01 | 100.0% | 52.4% |
| 4h3wA01 | 2.60.290.20 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain | 0.55 | 46.0 | 3.59e-01 | 100.0% | 44.0% |
| 4l1dC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.61e-01 | 100.0% | 61.5% |
| 5zi7A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.54 | 42.0 | 3.67e-01 | 100.0% | 55.2% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.54 | 39.0 | 2.99e-01 | 94.2% | 29.7% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 43.0 | 3.56e-01 | 100.0% | 49.5% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.54e-01 | 100.0% | 50.0% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 42.0 | 3.63e-01 | 100.0% | 61.5% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 43.0 | 3.46e-01 | 100.0% | 62.2% |
| 3rbgD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.59e-01 | 100.0% | 55.3% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 39.0 | 2.92e-01 | 100.0% | 29.7% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.52 | 41.0 | 3.99e-01 | 100.0% | 82.5% |
| 2kfwA01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 38.0 | 3.21e-01 | 92.3% | 65.5% |
| 3isyA00 | 2.60.40.2360 | Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI | 0.51 | 42.0 | 3.38e-01 | 100.0% | 56.4% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.42e-01 | 100.0% | 54.0% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.63e-01 | 100.0% | 64.8% |
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.38e-01 | 100.0% | 78.5% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2409668 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 52.0 | 3.69e-01 | 100.0% | 31.3% |
| 3787873 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.60 | 49.0 | 3.40e-01 | 98.1% | 97.1% |
| 3191165 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.59 | 53.0 | 4.46e-01 | 100.0% | 62.4% |
| 3933721 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.59 | 50.0 | 3.56e-01 | 98.1% | 37.6% |
| 1088178 | 1.1.5.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C | 0.58 | 43.0 | 2.95e-01 | 82.7% | 97.1% |
| 3925830 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 3.67e-01 | 100.0% | 40.7% |
| 4959375 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.57 | 43.0 | 2.99e-01 | 84.6% | 84.6% |
| 4465757 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 48.0 | 3.04e-01 | 98.1% | 18.6% |
| 5051014 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 3.94e-01 | 100.0% | 53.7% |
| 3952771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.90e-01 | 100.0% | 65.7% |
| 119269 | 2492.1.1.21 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC2 | 0.54 | 43.0 | 3.08e-01 | 96.2% | 34.9% |
| 4427418 | 11.1.1.1229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 | 0.54 | 46.0 | 3.87e-01 | 100.0% | 76.8% |
| 3249211 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.54 | 43.0 | 3.75e-01 | 100.0% | 54.4% |
| 3941935 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 44.0 | 3.55e-01 | 98.1% | 59.1% |
| 4990834 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.54 | 43.0 | 4.42e-01 | 96.2% | 100.0% |
| 394175 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 45.0 | 3.53e-01 | 100.0% | 65.9% |
| 4081896 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 38.0 | 3.05e-01 | 80.8% | 86.7% |
| 3593920 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 44.0 | 3.42e-01 | 100.0% | 40.8% |
| 184690 | 11.22.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin › CellEnv_BiogenAssoc | 0.53 | 42.0 | 3.54e-01 | 100.0% | 50.0% |
| 2559791 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.53 | 40.0 | 3.54e-01 | 94.2% | 61.1% |
| 4424877 | 1.1.5.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C | 0.53 | 37.0 | 2.61e-01 | 75.0% | 98.3% |
| 3238936 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 38.0 | 3.12e-01 | 98.1% | 36.7% |
| 3471940 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.53 | 40.0 | 2.93e-01 | 82.7% | 84.1% |
| 3838184 | 212.1.1.12 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › UPF0029 | 0.53 | 37.0 | 2.97e-01 | 80.8% | 56.0% |
| 3567641 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.52 | 41.0 | 3.64e-01 | 98.1% | 64.4% |
| 3255691 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.68e-01 | 100.0% | 64.4% |
| 4135543 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.52 | 42.0 | 3.32e-01 | 94.2% | 82.4% |
| 5082970 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.52 | 40.0 | 3.23e-01 | 90.4% | 100.0% |
| 4846619 | 5001.1.1.198 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Arrestin_N | 0.52 | 45.0 | 3.22e-01 | 100.0% | 54.1% |
| 3235066 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.51 | 41.0 | 3.24e-01 | 100.0% | 48.1% |
| 3700177 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.54e-01 | 100.0% | 66.7% |
| 4418109 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 40.0 | 3.13e-01 | 100.0% | 44.1% |
| 3263950 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.51 | 42.0 | 3.22e-01 | 100.0% | 43.0% |
| 4941983 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 41.0 | 3.16e-01 | 100.0% | 44.3% |
| 2323826 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.50 | 39.0 | 3.64e-01 | 98.1% | 65.4% |
| 3861034 | 11.1.1.895 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29538 | 0.50 | 39.0 | 3.22e-01 | 100.0% | 45.6% |
| 3845075 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.18e-01 | 100.0% | 42.3% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.50 | 38.0 | 3.70e-01 | 94.2% | 83.1% |
| 3562075 | 11.1.1.895 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29538 | 0.50 | 40.0 | 3.34e-01 | 100.0% | 50.0% |