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MW584197.1__QSM04365.1__PROPHIGD43A-4_55__00055

Bact-Vir

MW584197.1__QSM04365.1__PROPHIGD43A-4_55__00055

Identity

Accession:
MW584197 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 55.0 4.99e-01 76.5% 95.6%
1gd7A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 49.0 4.19e-01 75.0% 83.5%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 46.0 3.77e-01 75.0% 77.7%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 45.0 4.72e-01 76.5% 82.0%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 42.0 4.76e-01 79.4% 93.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 5.15e-01 86.8% 93.5%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.63 45.0 4.22e-01 75.0% 93.9%
3htnB00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.62 55.0 4.40e-01 100.0% 65.5%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 43.0 3.76e-01 72.1% 82.7%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.62 55.0 4.44e-01 100.0% 67.4%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 48.0 3.11e-01 86.8% 32.5%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.62 49.0 4.06e-01 86.8% 79.7%
2qw7C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.62 43.0 3.94e-01 75.0% 87.4%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 5.22e-01 91.2% 100.0%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 41.0 4.12e-01 86.8% 69.6%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 47.0 2.92e-01 86.8% 29.9%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.60 47.0 4.00e-01 85.3% 72.1%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 39.0 3.21e-01 85.3% 34.3%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.59 46.0 3.72e-01 86.8% 53.3%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 48.0 3.08e-01 94.1% 34.5%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.59 45.0 3.93e-01 85.3% 56.5%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 2.88e-01 88.2% 42.2%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 49.0 4.78e-01 97.1% 100.0%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 44.0 2.98e-01 86.8% 31.1%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 41.0 4.15e-01 76.5% 76.1%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.20e-01 86.8% 79.7%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.57 43.0 3.33e-01 85.3% 100.0%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 46.0 3.96e-01 88.2% 95.3%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 39.0 3.30e-01 75.0% 80.8%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.57 42.0 3.73e-01 85.3% 53.9%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 42.0 3.08e-01 80.9% 49.7%
1y8tA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 45.0 4.17e-01 88.2% 96.6%
6cxhA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.56 41.0 3.31e-01 79.4% 93.4%
3dg6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 38.0 3.27e-01 70.6% 58.8%
1lm4A00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.55 48.0 3.53e-01 100.0% 87.4%
4hj1A01 2.60.98.50 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › 0.55 46.0 3.56e-01 97.1% 74.7%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 43.0 4.27e-01 92.6% 83.1%
2zadA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 37.0 3.19e-01 70.6% 55.3%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 42.0 2.98e-01 88.2% 64.2%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 44.0 4.14e-01 97.1% 80.2%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.66e-01 94.1% 92.7%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.66e-01 89.7% 98.1%
2pjsA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 42.0 3.65e-01 86.8% 89.2%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 39.0 4.15e-01 91.2% 96.6%
6s5xA01 2.60.40.3600 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.95e-01 86.8% 84.0%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 36.0 2.93e-01 73.5% 46.7%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 3.48e-01 100.0% 85.7%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.39e-01 100.0% 43.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.92e-01 85.3% 92.2%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 43.0 3.01e-01 98.5% 85.9%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.50 41.0 3.43e-01 100.0% 83.2%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 73.0 7.22e-01 100.0% 92.9%
4958552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 54.0 4.48e-01 75.0% 60.9%
3703749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.30e-01 86.8% 81.5%
3787501 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.69 48.0 3.82e-01 73.5% 86.4%
3907176 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.68 59.0 5.45e-01 100.0% 94.4%
3197575 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.68 48.0 4.40e-01 75.0% 63.3%
3247792 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.68 46.0 3.84e-01 70.6% 78.3%
4026274 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.73e-01 98.5% 51.4%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 49.0 5.22e-01 79.4% 95.0%
2502534 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.66 46.0 4.29e-01 73.5% 62.1%
3399965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.39e-01 100.0% 78.9%
4377781 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 57.0 5.48e-01 100.0% 97.5%
3599752 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 54.0 3.37e-01 94.1% 30.4%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.64 58.0 4.51e-01 100.0% 47.6%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 50.0 4.57e-01 86.8% 70.0%
4207556 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.62 48.0 4.81e-01 85.3% 100.0%
4483150 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 44.0 3.41e-01 76.5% 68.8%
3981113 283.2.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.62 50.0 4.29e-01 89.7% 64.2%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 43.0 4.65e-01 83.8% 90.9%
4159881 220.1.1.197 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.61 48.0 4.36e-01 88.2% 81.1%
3606266 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 46.0 2.80e-01 86.8% 27.0%
2389667 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.59 42.0 3.87e-01 77.9% 75.5%
3760460 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 45.0 4.60e-01 85.3% 88.2%
4936963 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 4.45e-01 92.6% 88.2%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.51e-01 86.8% 94.8%
3989574 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.31e-01 92.6% 71.8%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 49.0 4.70e-01 100.0% 87.5%
3264852 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 48.0 3.62e-01 94.1% 41.2%
4033192 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 42.0 3.41e-01 77.9% 80.8%
3608215 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 49.0 3.86e-01 100.0% 50.3%
2137686 2003.1.2.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.57 46.0 3.77e-01 92.6% 90.3%
4937035 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.57 44.0 3.61e-01 89.7% 80.7%
3604574 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 44.0 3.79e-01 88.2% 82.6%
3469876 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.56 46.0 2.98e-01 95.6% 36.2%
4982277 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.56 38.0 3.86e-01 70.6% 84.6%
2754601 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.56 46.0 3.73e-01 92.6% 89.6%
3239313 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 45.0 2.99e-01 92.6% 45.0%
3290954 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.56 44.0 4.03e-01 89.7% 83.2%
4625348 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.56 43.0 4.49e-01 92.6% 95.0%
4974630 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.56 45.0 4.03e-01 92.6% 82.0%
4456732 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 42.0 4.01e-01 97.1% 70.0%
None 0.55 44.0 2.73e-01 88.2% 17.9%
5049077 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.55 45.0 3.24e-01 95.6% 78.2%
3286642 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 3.98e-01 100.0% 78.2%
4129953 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.53 40.0 4.10e-01 92.6% 87.7%
3279422 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.53 36.0 3.67e-01 88.2% 73.8%
3960441 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.52 43.0 2.97e-01 94.1% 35.6%
3902351 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.52 44.0 2.94e-01 100.0% 47.3%
4021000 206.1.2.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase 0.52 41.0 2.79e-01 89.7% 81.3%
3751611 10.1.1.77 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1, Laminin_G_2 0.52 43.0 3.19e-01 100.0% 70.2%
3933166 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.52 44.0 3.54e-01 100.0% 75.2%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 41.0 3.35e-01 94.1% 80.0%
3231481 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 40.0 2.83e-01 85.3% 69.8%
3892418 385.1.1.0 few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines 0.50 38.0 3.65e-01 82.4% 80.0%
5077400 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.50 37.0 3.29e-01 80.9% 54.8%
3420606 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.50 43.0 2.77e-01 100.0% 69.6%