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MW584198.1__QST90386.1__PROPHIGD43A-2_55__00054

Bact-Vir

MW584198.1__QST90386.1__PROPHIGD43A-2_55__00054

Identity

Accession:
MW584198 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-102
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14230.12 best DUF4333 30.5 4.90e-07 84.9% 78.2%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.79 64.0 4.86e-01 100.0% 37.8%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.75 60.0 4.66e-01 100.0% 39.9%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 5.40e-01 100.0% 96.3%
3dukA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 5.51e-01 100.0% 90.4%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 5.52e-01 100.0% 89.6%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 5.45e-01 100.0% 81.2%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 65.0 5.49e-01 100.0% 91.9%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 56.0 5.97e-01 100.0% 96.8%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 61.0 5.36e-01 94.5% 99.1%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 50.0 5.00e-01 91.8% 70.7%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 63.0 5.53e-01 100.0% 96.3%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 62.0 5.16e-01 100.0% 89.3%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 56.0 4.46e-01 100.0% 42.5%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.69 55.0 4.74e-01 100.0% 54.8%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 61.0 5.20e-01 100.0% 86.0%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 60.0 4.97e-01 100.0% 86.0%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.69 61.0 4.69e-01 97.3% 69.4%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 60.0 4.68e-01 97.3% 47.4%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 61.0 5.14e-01 100.0% 87.7%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 59.0 4.83e-01 100.0% 76.8%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 54.0 4.33e-01 100.0% 42.5%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 51.0 4.34e-01 100.0% 50.0%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 51.0 4.11e-01 100.0% 41.8%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 57.0 5.25e-01 100.0% 84.0%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 52.0 4.21e-01 100.0% 43.8%
5e4bA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 56.0 4.21e-01 95.9% 38.6%
3fcyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 46.0 3.04e-01 75.3% 29.0%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 46.0 3.03e-01 76.7% 27.0%
5ih0A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 56.0 5.15e-01 97.3% 100.0%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.63 48.0 4.34e-01 94.5% 57.9%
1vlrA01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.63 47.0 4.27e-01 79.5% 91.8%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 53.0 4.47e-01 97.3% 84.5%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.62 44.0 3.26e-01 75.3% 30.6%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 55.0 5.10e-01 97.3% 98.9%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 51.0 4.04e-01 94.5% 44.1%
7dmdA01 3.15.10.20 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain 0.60 53.0 4.42e-01 100.0% 66.7%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 51.0 3.50e-01 100.0% 30.8%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 50.0 4.79e-01 94.5% 98.9%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 44.0 3.90e-01 82.2% 86.8%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.59 46.0 3.89e-01 89.0% 69.3%
4js8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 48.0 4.46e-01 87.7% 96.6%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.58 45.0 4.46e-01 97.3% 79.7%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 53.0 4.13e-01 100.0% 85.5%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 50.0 4.44e-01 100.0% 93.6%
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.58 49.0 4.03e-01 100.0% 50.7%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 42.0 3.78e-01 80.8% 55.2%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 49.0 4.37e-01 100.0% 77.5%
4hoiB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 49.0 4.28e-01 100.0% 89.5%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.56 49.0 3.97e-01 100.0% 54.5%
1gwyA00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.56 46.0 3.54e-01 93.2% 97.1%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 48.0 4.02e-01 100.0% 64.4%
4i2yA01 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.54 46.0 3.32e-01 100.0% 80.5%
4joxA00 2.60.270.50 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.53 42.0 3.66e-01 89.0% 70.3%
3ek7A01 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 45.0 3.20e-01 98.6% 62.3%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.50 44.0 4.12e-01 100.0% 88.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959466 243.3.1.29 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4333 0.92 86.0 8.57e-01 100.0% 97.3%
6317 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.75 60.0 4.66e-01 100.0% 39.9%
5075975 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.74 59.0 4.57e-01 100.0% 38.2%
6397 243.1.1.30 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4904 0.74 66.0 5.45e-01 100.0% 81.2%
4032043 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.73 59.0 4.54e-01 100.0% 39.4%
3948878 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.73 64.0 5.41e-01 100.0% 96.8%
3226144 243.1.1.82 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 0.72 64.0 4.99e-01 100.0% 83.6%
3247589 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 64.0 5.27e-01 100.0% 87.2%
136977 243.1.1.20 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4878 0.72 61.0 5.36e-01 94.5% 99.1%
146266 295.1.1.8 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.72 50.0 4.78e-01 91.8% 63.1%
4031480 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 63.0 5.86e-01 100.0% 78.9%
408353 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.70 56.0 4.47e-01 100.0% 42.8%
420412 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.70 55.0 4.50e-01 100.0% 46.7%
3232891 883.1.1.22 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 0.69 63.0 4.40e-01 100.0% 55.6%
1716100 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.69 61.0 5.20e-01 100.0% 86.0%
3785652 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.69 60.0 4.72e-01 100.0% 88.7%
4177861 243.1.1.66 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_5th 0.69 59.0 5.11e-01 100.0% 87.5%
4348187 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 61.0 5.86e-01 100.0% 89.4%
5018171 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 56.0 5.57e-01 100.0% 86.7%
3935776 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 61.0 3.95e-01 100.0% 28.0%
408891 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.69 56.0 4.40e-01 100.0% 42.6%
3703242 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.69 53.0 4.45e-01 100.0% 50.0%
169841 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.68 61.0 5.14e-01 100.0% 87.7%
3681671 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.68 59.0 4.76e-01 100.0% 90.7%
4793345 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.68 56.0 4.97e-01 100.0% 62.6%
3593024 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.68 54.0 4.63e-01 100.0% 54.8%
3861852 883.1.1.22 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 0.67 61.0 4.35e-01 100.0% 67.1%
3818341 331.9.1.4 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.67 53.0 5.19e-01 90.4% 79.5%
3228722 331.9.1.4 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.67 55.0 4.48e-01 100.0% 48.9%
5081827 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.67 59.0 3.98e-01 100.0% 47.3%
3466699 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 56.0 5.17e-01 100.0% 88.8%
4026002 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 58.0 3.63e-01 98.6% 24.3%
3706713 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.45e-01 98.6% 19.8%
3934844 206.1.1.44 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 0.64 56.0 3.52e-01 100.0% 34.1%
3300968 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.27e-01 100.0% 10.4%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.63 55.0 4.61e-01 98.6% 77.7%
3923273 206.1.1.44 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 0.63 53.0 3.39e-01 98.6% 37.5%
5003610 3153.1.1.0 a+b two layers › PipX › PipX › PipX 0.63 49.0 4.49e-01 83.6% 77.9%
4199940 243.3.1.75 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF6504 0.62 55.0 4.93e-01 100.0% 78.6%
3698492 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.62 49.0 4.15e-01 100.0% 51.2%
3668772 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.62 55.0 4.19e-01 100.0% 44.1%
3322026 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.60 53.0 4.19e-01 100.0% 51.0%
4984287 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 53.0 4.08e-01 100.0% 85.9%
None 0.59 50.0 3.92e-01 97.3% 43.2%
3710638 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 50.0 3.93e-01 100.0% 42.9%
4992590 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.59 50.0 3.78e-01 93.2% 42.3%
5052962 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.59 44.0 3.67e-01 80.8% 56.7%
3343255 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.58 52.0 3.14e-01 100.0% 19.0%
135071 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.58 53.0 4.13e-01 100.0% 85.5%
3585074 206.1.1.8 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC 0.58 51.0 3.25e-01 98.6% 30.1%
3402405 4.1.1.326 beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.57 42.0 4.49e-01 100.0% 93.7%
3934544 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 42.0 2.84e-01 82.2% 30.5%
3606892 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.57 40.0 3.38e-01 74.0% 89.6%
3414586 11.1.1.824 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 0.56 42.0 3.93e-01 100.0% 63.4%
3633634 5.1.4.80 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.56 47.0 3.01e-01 100.0% 22.7%
3707461 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.56 38.0 3.23e-01 74.0% 83.0%
3617638 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 42.0 3.74e-01 83.6% 62.9%
4056618 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 46.0 3.87e-01 97.3% 65.6%
3402616 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.53 47.0 3.75e-01 100.0% 54.0%
3686733 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.52 37.0 3.84e-01 75.3% 83.1%
1160884 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 35.0 3.30e-01 72.6% 55.3%