Back to structures

MW584207.1__QSM05009.1__PROPHIGD12-2_79__00079

Bact-Vir

MW584207.1__QSM05009.1__PROPHIGD12-2_79__00079

Identity

Accession:
MW584207 ↗
Kingdom:
phage

Quality

79.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-176
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 68.0 6.87e-01 100.0% 97.6%
6mavB02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 49.0 5.81e-01 81.4% 100.0%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 37.0 4.89e-01 86.0% 91.4%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 49.0 5.76e-01 72.1% 100.0%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 47.0 5.35e-01 73.6% 89.7%
1kl9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 35.0 4.45e-01 87.6% 84.0%
4jbjA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 44.0 4.79e-01 76.7% 77.3%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 48.0 5.46e-01 72.9% 99.0%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 62.0 5.84e-01 100.0% 84.1%
6ro0D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 50.0 5.43e-01 77.5% 98.2%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 47.0 5.36e-01 74.4% 96.0%
4pmwA02 2.40.50.700 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 40.0 4.90e-01 72.9% 100.0%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 40.0 4.91e-01 75.2% 98.8%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 57.0 5.54e-01 100.0% 90.2%
2k52A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 35.0 4.42e-01 87.6% 94.6%
1luzA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 39.0 4.59e-01 75.2% 92.9%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 45.0 4.72e-01 73.6% 100.0%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 50.0 5.27e-01 93.8% 100.0%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 49.0 4.53e-01 99.2% 69.7%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 43.0 4.72e-01 75.2% 96.1%
3psiA06 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 35.0 3.97e-01 86.8% 77.0%
2cqoA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 37.0 4.30e-01 89.9% 90.2%
2khiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 37.0 4.22e-01 74.4% 87.4%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 4.15e-01 79.1% 84.3%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 4.18e-01 81.4% 81.5%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 44.0 4.73e-01 92.2% 98.2%
2nn6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 42.0 4.22e-01 84.5% 79.1%
1go3E01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 4.35e-01 83.7% 100.0%
1qzgA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 46.0 4.24e-01 95.3% 82.4%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 37.0 3.13e-01 70.5% 82.9%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.52 35.0 4.01e-01 72.1% 100.0%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3542540 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.80 66.0 6.95e-01 100.0% 94.8%
5017785 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.80 64.0 6.83e-01 100.0% 94.8%
3626705 2.3.1.3 beta barrels › OB-fold › TIMP-like › TIMP-like › NtA 0.79 63.0 6.51e-01 100.0% 89.2%
4927128 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.79 59.0 6.59e-01 96.1% 99.0%
3921982 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.77 63.0 6.03e-01 100.0% 75.9%
4929168 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.77 62.0 6.40e-01 96.1% 90.0%
3287503 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.76 72.0 7.16e-01 100.0% 96.3%
4469294 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.75 62.0 6.45e-01 100.0% 93.3%
3589263 2.1.1.222 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_YrrC 0.75 46.0 5.77e-01 73.6% 100.0%
4347469 2.3.1.1 beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP 0.74 60.0 6.26e-01 100.0% 91.7%
4337719 2.3.1.3 beta barrels › OB-fold › TIMP-like › TIMP-like › NtA 0.74 68.0 6.78e-01 100.0% 96.2%
4225693 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.74 61.0 6.30e-01 100.0% 93.3%
4927408 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.73 60.0 6.24e-01 96.1% 92.5%
4955341 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 47.0 5.16e-01 71.3% 79.0%
3237286 2.3.1.3 beta barrels › OB-fold › TIMP-like › TIMP-like › NtA 0.73 55.0 6.10e-01 96.9% 97.1%
3999307 2.1.1.146 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1-like 0.71 40.0 5.15e-01 70.5% 100.0%
3571564 2.1.1.146 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1-like 0.71 37.0 5.01e-01 70.5% 100.0%
4966111 2.1.1.378 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 0.71 41.0 5.31e-01 72.1% 100.0%
4439550 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.70 60.0 5.77e-01 100.0% 81.1%
3540524 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 39.0 4.85e-01 72.1% 88.7%
3629129 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 43.0 5.30e-01 83.7% 100.0%
395 2.2.1.7 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S4-tox 0.67 51.0 5.49e-01 78.3% 98.2%
3713587 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 45.0 5.02e-01 71.3% 87.0%
3916321 2.3.1.4 beta barrels › OB-fold › TIMP-like › TIMP-like › PF30598 0.66 56.0 5.76e-01 98.4% 92.8%
3393395 2.3.1.11 beta barrels › OB-fold › TIMP-like › TIMP-like › Vein_beta-barrel 0.66 59.0 5.98e-01 100.0% 95.4%
3413189 2.1.1.141 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB 0.66 49.0 4.45e-01 76.0% 90.3%
3540463 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.66 58.0 5.66e-01 100.0% 87.1%
5023132 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.65 45.0 4.87e-01 70.5% 100.0%
3613592 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 45.0 4.17e-01 70.5% 70.6%
4047115 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.65 45.0 5.11e-01 71.3% 100.0%
5003898 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.65 46.0 4.84e-01 72.1% 88.7%
3733759 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 47.0 4.64e-01 88.4% 71.9%
3630622 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 46.0 4.80e-01 74.4% 80.8%
3392389 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 48.0 5.04e-01 79.1% 100.0%
3808110 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.63 46.0 4.35e-01 74.4% 70.0%
158926 2.1.1.3 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.63 39.0 4.60e-01 81.4% 89.9%
4995707 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 42.0 4.69e-01 71.3% 86.0%
5037168 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.63 47.0 4.78e-01 76.0% 100.0%
3258413 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.62 46.0 4.63e-01 78.3% 76.2%
3497521 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.62 51.0 5.13e-01 99.2% 87.7%
4993852 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 46.0 4.94e-01 76.7% 100.0%
3266828 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.62 40.0 4.27e-01 75.2% 73.9%
4026903 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 43.0 4.52e-01 72.1% 100.0%
3471170 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 44.0 4.54e-01 74.4% 100.0%
3495800 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 47.0 4.51e-01 79.8% 93.8%
3255112 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.61 44.0 4.71e-01 75.2% 98.3%
3623452 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.60 56.0 5.13e-01 100.0% 79.3%
4024838 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.60 44.0 4.72e-01 74.4% 100.0%
3230278 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.60 54.0 5.06e-01 99.2% 79.2%
3707903 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.60 39.0 3.51e-01 75.2% 47.2%
3797373 2.1.1.249 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_2nd 0.60 37.0 4.24e-01 78.3% 84.2%
3991931 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.60 46.0 4.80e-01 80.6% 94.2%
5029258 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 41.0 4.54e-01 70.5% 90.0%
3963716 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 41.0 4.45e-01 72.1% 88.2%
4022560 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 4.51e-01 91.5% 85.3%
3488538 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 4.90e-01 89.1% 88.5%
3309415 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 36.0 4.06e-01 94.6% 81.0%
3931744 2.1.1.141 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB 0.57 49.0 4.62e-01 89.1% 92.7%
5000723 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 48.0 5.02e-01 96.1% 95.8%
3470958 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 50.0 4.34e-01 93.0% 100.0%
3711252 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.57 49.0 4.75e-01 90.7% 92.9%
3611898 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 50.0 5.10e-01 96.1% 96.8%
3385925 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 36.0 4.05e-01 92.2% 85.3%
3498011 2.1.1.116 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.56 37.0 4.04e-01 94.6% 81.9%
4031097 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 34.0 3.89e-01 88.4% 82.1%
3506791 2.1.1.69 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.56 51.0 4.93e-01 99.2% 96.6%
3595152 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 48.0 4.36e-01 94.6% 97.1%
3712229 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.56 46.0 4.14e-01 86.8% 100.0%
None 0.55 48.0 3.04e-01 94.6% 23.2%
5017465 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 48.0 4.85e-01 95.3% 98.4%
4053036 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.54 34.0 3.86e-01 89.1% 85.3%
3806939 2.1.1.105 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB 0.53 37.0 4.19e-01 72.1% 100.0%
4987517 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.52 43.0 4.39e-01 91.5% 96.9%
4943890 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 42.0 4.23e-01 89.1% 91.9%
5036890 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 42.0 4.35e-01 88.4% 96.0%
4999913 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 42.0 4.31e-01 89.1% 96.8%
3623874 2.1.1.51 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.51 41.0 4.08e-01 86.8% 90.4%
4967975 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 42.0 4.28e-01 90.7% 93.8%
4954140 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 42.0 4.22e-01 89.1% 95.4%
5042801 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 41.0 4.17e-01 88.4% 92.3%