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MW584209.1__QSM05062.1__PROPHIGD04-1_41__00039

Bact-Vir

MW584209.1__QSM05062.1__PROPHIGD04-1_41__00039

Identity

Accession:
MW584209 ↗
Kingdom:
phage

Quality

95.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-110
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 48.0 5.07e-01 100.0% 66.7%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 49.0 4.68e-01 100.0% 54.8%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.77 53.0 6.08e-01 100.0% 95.1%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 48.0 5.57e-01 100.0% 87.3%
2o5hA00 1.10.3510.10 Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like 0.76 68.0 6.40e-01 98.1% 80.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 49.0 4.47e-01 100.0% 51.1%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 48.0 4.48e-01 100.0% 52.3%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 46.0 5.18e-01 94.4% 78.6%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.48e-01 100.0% 79.2%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.21e-01 100.0% 71.4%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.75 44.0 5.30e-01 93.5% 90.0%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 42.0 4.73e-01 91.7% 71.4%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 34.0 4.59e-01 75.0% 83.9%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.18e-01 100.0% 73.8%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 48.0 5.23e-01 100.0% 79.3%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 44.0 4.96e-01 93.5% 77.6%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 5.17e-01 97.2% 88.5%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 43.0 4.85e-01 94.4% 80.5%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 5.11e-01 99.1% 88.0%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.71e-01 100.0% 68.4%
1ussA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 5.06e-01 96.3% 86.4%
2ph7A01 1.10.3400.10 Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like 0.67 44.0 4.20e-01 97.2% 58.1%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.98e-01 100.0% 80.4%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 5.73e-01 100.0% 92.4%
2fmlB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 38.0 4.67e-01 96.3% 98.4%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.55e-01 100.0% 69.2%
2hqrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 40.0 4.12e-01 97.2% 67.0%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.77e-01 99.1% 88.0%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.59 37.0 4.13e-01 96.3% 83.7%
1uhwA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.78e-01 96.3% 88.1%
3hdiA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.57 41.0 3.37e-01 74.1% 73.7%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.56 44.0 4.47e-01 83.3% 86.1%
1tizA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 35.0 4.12e-01 78.7% 100.0%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 41.0 4.35e-01 92.6% 89.5%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 37.0 3.98e-01 79.6% 85.1%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 37.0 3.63e-01 83.3% 63.6%
3rrcB01 1.20.1310.20 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain 0.54 42.0 3.75e-01 83.3% 81.0%
1elkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 37.0 3.31e-01 79.6% 50.3%
4gyoA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 34.0 2.72e-01 79.6% 30.5%
3vkgB06 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.53 36.0 2.83e-01 100.0% 31.0%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.53 37.0 4.06e-01 83.3% 92.9%
3ih6E00 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 41.0 3.48e-01 85.2% 92.3%
2d6yA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 42.0 3.53e-01 89.8% 65.6%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 36.0 4.02e-01 100.0% 98.8%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 42.0 3.60e-01 91.7% 65.9%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 36.0 2.93e-01 74.1% 72.4%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 37.0 3.49e-01 78.7% 85.4%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.82 53.0 5.52e-01 100.0% 71.0%
3237291 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 51.0 5.55e-01 99.1% 77.8%
3994510 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 52.0 4.72e-01 100.0% 52.1%
5057920 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.78 52.0 5.77e-01 99.1% 85.9%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 53.0 4.67e-01 100.0% 49.7%
4937876 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 51.0 4.81e-01 100.0% 57.6%
4973555 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 50.0 4.22e-01 100.0% 41.8%
5045747 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 52.0 5.66e-01 100.0% 83.3%
4948120 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 52.0 5.62e-01 100.0% 83.3%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 53.0 4.55e-01 100.0% 48.1%
3167163 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.75 52.0 5.57e-01 100.0% 81.1%
3951258 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 51.0 4.48e-01 100.0% 49.3%
5002609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 6.02e-01 100.0% 89.5%
5065832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 48.0 5.05e-01 99.1% 71.0%
4972111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.47e-01 100.0% 78.0%
4998174 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 52.0 4.30e-01 100.0% 42.8%
3824526 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 4.72e-01 100.0% 56.3%
4934021 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 45.0 4.36e-01 97.2% 54.2%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 4.44e-01 100.0% 48.1%
4973627 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 50.0 4.78e-01 100.0% 60.8%
4959456 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 51.0 4.30e-01 100.0% 45.3%
5028329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 46.0 5.41e-01 94.4% 92.0%
3287376 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.73 49.0 4.15e-01 100.0% 42.9%
5072114 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 49.0 4.39e-01 100.0% 50.0%
5047364 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 50.0 5.03e-01 100.0% 70.0%
5002871 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 46.0 4.76e-01 100.0% 69.0%
4960288 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 51.0 4.27e-01 100.0% 45.1%
3402809 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.72 45.0 5.04e-01 98.1% 81.2%
3401123 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.71 43.0 5.02e-01 98.1% 86.7%
3499387 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.71 46.0 4.60e-01 100.0% 63.6%
4945099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 4.68e-01 100.0% 61.6%
4977905 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 39.0 4.75e-01 91.7% 84.3%
4942972 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 46.0 5.17e-01 98.1% 88.7%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 50.0 4.16e-01 100.0% 43.9%
3289681 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 50.0 4.05e-01 100.0% 40.5%
3657247 101.1.2.401 alpha arrays › HTH › HTH › winged helix domain › WH_GTF3C1_N 0.70 58.0 5.90e-01 100.0% 92.4%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 50.0 4.13e-01 100.0% 43.2%
4977548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 46.0 4.54e-01 97.2% 62.6%
4997123 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 48.0 3.84e-01 100.0% 37.5%
2831815 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.70 43.0 4.91e-01 100.0% 82.7%
4978412 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 49.0 4.14e-01 100.0% 45.1%
3278037 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 49.0 3.99e-01 100.0% 41.0%
3244600 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.69 56.0 5.72e-01 100.0% 88.6%
4943782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 4.79e-01 100.0% 66.7%
3695839 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.69 44.0 5.10e-01 94.4% 94.6%
3467284 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.69 44.0 4.50e-01 100.0% 65.7%
4929586 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 46.0 5.11e-01 88.9% 87.1%
3657248 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.68 49.0 4.99e-01 94.4% 76.2%
4978090 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 48.0 3.82e-01 100.0% 36.7%
3347816 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.68 48.0 4.78e-01 94.4% 69.6%
3356447 207.1.1.258 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WH_DRP 0.67 40.0 2.84e-01 87.0% 20.8%
3285760 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 48.0 4.04e-01 100.0% 45.6%
3209919 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.65 50.0 5.18e-01 100.0% 87.0%
5038136 101.1.16.1 alpha arrays › HTH › HTH › Ribosomal protein L11, C-terminal domain › Ribosomal_L11 0.65 49.0 5.40e-01 84.3% 100.0%
4968330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.02e-01 100.0% 76.5%
3810002 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.64 47.0 4.72e-01 100.0% 75.5%
3893017 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 37.0 3.94e-01 99.1% 65.3%
3726615 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.63 45.0 4.46e-01 100.0% 69.6%
3598642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.42e-01 98.1% 63.9%
3534019 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.63 40.0 4.34e-01 95.4% 76.7%
3781705 101.1.2.527 alpha arrays › HTH › HTH › winged helix domain › WH_RGF3 0.62 49.0 4.85e-01 100.0% 79.1%
3468223 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.62 50.0 3.52e-01 92.6% 27.5%
3739861 101.1.2.198 alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.61 49.0 4.82e-01 100.0% 80.0%
3512361 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.59 39.0 4.24e-01 100.0% 84.7%
3242475 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.59 41.0 4.42e-01 100.0% 86.7%
4988855 3754.1.1.1 alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 0.57 44.0 3.18e-01 83.3% 55.1%
4934748 3754.1.1.1 alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 0.57 44.0 3.23e-01 84.3% 54.6%
5048461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 37.0 4.09e-01 94.4% 85.9%
3829353 101.1.2.641 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 0.54 49.0 3.15e-01 100.0% 32.5%
3168877 109.4.1.1573 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 0.54 36.0 3.39e-01 82.4% 52.1%
4095683 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.53 38.0 2.35e-01 75.9% 25.0%
3016249 532.2.1.0 alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains 0.53 35.0 3.70e-01 79.6% 74.7%
3606096 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 36.0 2.93e-01 78.7% 35.8%
3230061 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.52 39.0 2.85e-01 76.9% 32.0%