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MW584871.1__QSJ03506.1__X__00109

Bact-Vir

MW584871.1__QSJ03506.1__X__00109

Identity

Accession:
MW584871 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tulanevirus› Aeromonas_phage_vB_AsM_ZHF

TaxID: 2812849

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-69
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08010.17 best Phage_30_3 59.5 4.50e-16 93.8% 42.8%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x6iB00 1.10.150.250 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase 0.69 39.0 3.54e-01 100.0% 41.4%
2spcA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 33.0 2.79e-01 90.6% 32.7%
4q9aA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.57 48.0 3.35e-01 95.3% 28.8%
2n5hA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.57 38.0 3.43e-01 100.0% 50.0%
1oxjA02 1.25.40.170 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain 0.56 44.0 3.81e-01 89.1% 53.2%
2kuaA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 47.0 3.71e-01 100.0% 44.4%
1vbkA02 3.30.2300.10 Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily 0.56 44.0 4.13e-01 93.8% 69.5%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 38.0 3.81e-01 71.9% 80.9%
2vs0A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.55 40.0 3.75e-01 78.1% 100.0%
3ipiA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 47.0 3.17e-01 100.0% 98.9%
1tfkB00 1.20.120.650 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D 0.55 37.0 3.45e-01 71.9% 100.0%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 40.0 3.53e-01 79.7% 69.5%
2jl1A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.07e-01 95.3% 31.6%
4d8mA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.53 41.0 2.90e-01 84.4% 47.7%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.52 45.0 3.21e-01 100.0% 30.7%
4s1pA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 38.0 2.87e-01 82.8% 29.3%
3qowA01 1.10.260.60 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.50 37.0 3.08e-01 85.9% 41.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3252953 219.1.1.9 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 0.64 38.0 2.47e-01 95.3% 13.1%
5020872 1079.1.1.1 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD 0.61 52.0 3.70e-01 98.4% 83.9%
2540675 5063.1.1.1 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK 0.59 34.0 3.20e-01 98.4% 44.9%
3338341 601.42.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain › At4g04980_N 0.59 43.0 3.51e-01 79.7% 88.0%
3511834 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.58 49.0 4.02e-01 100.0% 86.9%
3581772 4177.1.1.8 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.58 40.0 2.59e-01 71.9% 16.8%
4028337 3573.1.1.1 ↗ alpha arrays › Histone RNA hairpin-binding protein RNA-binding domain › Histone RNA hairpin-binding protein RNA-binding domain › Histone RNA hairpin-binding protein RNA-binding domain › SLBP_RNA_bind 0.57 42.0 4.28e-01 79.7% 84.6%
3786069 604.12.1.56 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ASTER 0.57 45.0 4.37e-01 85.9% 84.3%
5053157 2004.5.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain 0.56 44.0 2.97e-01 90.6% 79.3%
4018891 630.1.1.0 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain 0.56 48.0 3.57e-01 95.3% 100.0%
3256828 622.1.1.0 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain 0.55 46.0 4.02e-01 100.0% 77.3%
4144425 150.5.1.94 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PKHD_C 0.54 38.0 3.65e-01 73.4% 74.3%
3940232 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 40.0 3.46e-01 84.4% 87.6%
3399808 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.52 40.0 3.11e-01 85.9% 83.9%
3620375 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.52 38.0 2.84e-01 76.6% 35.5%
3765101 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.52 40.0 2.69e-01 93.8% 19.2%
3778896 109.4.1.816 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N 0.52 43.0 2.67e-01 96.9% 16.3%
3601405 2006.1.4.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.51 40.0 3.07e-01 90.6% 45.9%