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MW598459.1__UGL59843.1__X__00027
Bact-VirMW598459.1__UGL59843.1__X__00027
Identity
- Accession:
- MW598459 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Gaprivervirus›
Escherichia_phage_vB_EcoM_RZ
TaxID: 2893954
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-67
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vqzA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 43.0 | 2.96e-01 | 82.0% | 86.0% |
D2
high
residues 84-169
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.61 | 35.0 | 3.69e-01 | 84.9% | 62.0% |
| 3n98A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.56 | 44.0 | 2.87e-01 | 86.0% | 98.8% |
| 4phtY02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.55 | 29.0 | 3.28e-01 | 100.0% | 66.1% |
| 2v3jA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.54 | 48.0 | 3.68e-01 | 100.0% | 85.9% |
| 2nbsA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 47.0 | 4.27e-01 | 97.7% | 77.6% |
| 2f48A02 | 3.40.50.460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain | 0.54 | 44.0 | 3.59e-01 | 97.7% | 76.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3771226 | 382.1.1.3 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp | 0.63 | 35.0 | 3.50e-01 | 84.9% | 52.2% |
| 3727322 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.54 | 45.0 | 3.49e-01 | 95.3% | 57.6% |
| 3234660 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.53 | 40.0 | 2.96e-01 | 82.6% | 58.8% |
| 4601711 | 2484.1.1.47 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › T2SSL | 0.51 | 32.0 | 3.19e-01 | 100.0% | 57.9% |
D3
high
residues 175-320
Domain cluster:
rep: MK327928.1__QBO60740.1__G2133_00001__00001__D36-176