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MW651859.1__QSH74592.1__pAN_18__00018
Bact-VirMW651859.1__QSH74592.1__pAN_18__00018
Identity
- Accession:
- MW651859 ↗
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 96-138
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.75 | 52.0 | 3.64e-01 | 100.0% | 23.5% |
| 2jeuA02 | 2.170.200.10 | Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain | 0.70 | 57.0 | 4.48e-01 | 97.7% | 41.6% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.69 | 51.0 | 3.56e-01 | 100.0% | 24.3% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.68 | 47.0 | 3.01e-01 | 72.1% | 25.4% |
| 1qqhA00 | 2.170.200.10 | Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain | 0.68 | 53.0 | 3.88e-01 | 97.7% | 29.9% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.66 | 47.0 | 4.18e-01 | 83.7% | 50.0% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 44.0 | 2.82e-01 | 90.7% | 45.2% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 40.0 | 2.80e-01 | 100.0% | 20.0% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.58 | 47.0 | 3.79e-01 | 100.0% | 71.4% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.57 | 51.0 | 4.06e-01 | 100.0% | 73.8% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.23e-01 | 79.1% | 37.0% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 45.0 | 3.46e-01 | 100.0% | 35.9% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.56 | 46.0 | 3.54e-01 | 100.0% | 38.1% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.56 | 42.0 | 2.67e-01 | 93.0% | 93.3% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.56 | 42.0 | 2.79e-01 | 93.0% | 66.5% |
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.55 | 44.0 | 3.09e-01 | 100.0% | 29.1% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.54 | 46.0 | 3.73e-01 | 100.0% | 50.0% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.22e-01 | 93.0% | 38.7% |
| 1dlcA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.53 | 43.0 | 2.84e-01 | 95.3% | 20.8% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.53 | 39.0 | 2.91e-01 | 88.4% | 56.0% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 44.0 | 2.75e-01 | 100.0% | 18.3% |
| 1i5pA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.51 | 41.0 | 2.81e-01 | 100.0% | 21.7% |
| 4dywA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 40.0 | 3.05e-01 | 100.0% | 54.3% |
| 1xf1A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.11e-01 | 88.4% | 59.4% |
| 4m3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 2.92e-01 | 97.7% | 41.5% |
| 3e07A00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.51 | 39.0 | 3.16e-01 | 88.4% | 52.2% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.51 | 35.0 | 3.02e-01 | 81.4% | 39.8% |
| 4k3bA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 34.0 | 2.90e-01 | 76.7% | 35.9% |
| 1lwdA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.50 | 36.0 | 2.15e-01 | 81.4% | 23.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046591 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.73 | 57.0 | 3.62e-01 | 100.0% | 16.3% |
| 4942140 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.72 | 53.0 | 3.92e-01 | 95.3% | 29.6% |
| 2083 | 52.1.1.1 ↗ | beta sandwiches › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › PPV_E2_N | 0.68 | 53.0 | 3.88e-01 | 97.7% | 29.9% |
| 4245972 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.67 | 46.0 | 3.02e-01 | 83.7% | 15.6% |
| 4464762 | 2003.1.2.102 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 | 0.66 | 51.0 | 3.01e-01 | 100.0% | 10.6% |
| 2084 | 52.1.1.1 ↗ | beta sandwiches › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › PPV_E2_N | 0.65 | 52.0 | 3.54e-01 | 100.0% | 37.6% |
| 3940894 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.65 | 51.0 | 3.63e-01 | 93.0% | 64.7% |
| 4941961 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.65 | 49.0 | 3.69e-01 | 95.3% | 32.0% |
| 3193339 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.64 | 54.0 | 3.74e-01 | 100.0% | 34.4% |
| 3822963 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 48.0 | 3.53e-01 | 100.0% | 29.2% |
| 3266048 | 213.1.1.26 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_4 | 0.64 | 52.0 | 3.55e-01 | 100.0% | 31.4% |
| 3356712 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.31e-01 | 76.7% | 71.1% |
| 142721 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.62 | 45.0 | 4.00e-01 | 83.7% | 50.7% |
| 3680919 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 46.0 | 3.58e-01 | 100.0% | 33.0% |
| 3598720 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.60 | 45.0 | 2.88e-01 | 86.0% | 15.2% |
| 3498490 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.29e-01 | 90.7% | 96.9% |
| 3915702 | 3426.1.1.1 ↗ | beta meanders › Telethonin › Telethonin › Telethonin › Telethonin | 0.57 | 49.0 | 3.86e-01 | 97.7% | 67.8% |
| 5064620 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 43.0 | 3.13e-01 | 86.0% | 94.4% |
| 3898866 | 3426.1.1.0 ↗ | beta meanders › Telethonin › Telethonin › Telethonin | 0.56 | 47.0 | 4.17e-01 | 100.0% | 65.1% |
| 5023445 | 289.1.1.2 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Zn_protease | 0.54 | 49.0 | 3.37e-01 | 100.0% | 44.3% |
| 5017777 | 289.1.1.2 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Zn_protease | 0.54 | 49.0 | 3.22e-01 | 100.0% | 36.5% |
| 4096233 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.54 | 44.0 | 3.02e-01 | 100.0% | 28.2% |
| 4056773 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.54 | 49.0 | 3.85e-01 | 100.0% | 55.3% |
| 3987299 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.53 | 43.0 | 3.17e-01 | 100.0% | 35.6% |
| 4256308 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.53 | 43.0 | 3.04e-01 | 100.0% | 30.6% |
| 4159896 | 2003.1.1.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_5 | 0.53 | 40.0 | 2.44e-01 | 100.0% | 75.5% |
| 2701957 | 6023.1.1.1 ↗ | beta barrels › Restriction endonuclease PabI › Restriction endonuclease PabI › Restriction endonuclease PabI › RE_R_Pab1 | 0.53 | 39.0 | 2.66e-01 | 95.3% | 75.2% |
| 5054850 | 3425.2.1.0 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain | 0.53 | 43.0 | 2.74e-01 | 100.0% | 78.5% |
| 3802784 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.52 | 36.0 | 3.21e-01 | 100.0% | 47.1% |
| 3623796 | 4154.1.1.1 ↗ | beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › DP | 0.51 | 38.0 | 2.79e-01 | 90.7% | 65.3% |
| 4079740 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.51 | 41.0 | 3.27e-01 | 100.0% | 44.8% |
| 3669809 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 40.0 | 3.07e-01 | 100.0% | 68.8% |
| 418302 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.50 | 33.0 | 2.26e-01 | 76.7% | 15.0% |
| 1144777 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.50 | 36.0 | 2.96e-01 | 95.3% | 36.5% |