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MW660583.1__QVQ57116.1__X__00046

Bact-Vir

MW660583.1__QVQ57116.1__X__00046

Identity

Accession:
MW660583 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-82
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 32.0 1.80e-07 100.0% 96.1%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 6.41e-01 100.0% 70.8%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.81 72.0 5.23e-01 100.0% 40.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.81 71.0 6.18e-01 100.0% 94.4%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.80 70.0 5.93e-01 100.0% 72.2%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.78 68.0 5.37e-01 100.0% 50.5%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 67.0 4.88e-01 100.0% 39.2%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 65.0 4.90e-01 100.0% 62.8%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 64.0 4.94e-01 100.0% 45.1%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 4.60e-01 78.7% 73.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 3.91e-01 78.7% 45.2%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.41e-01 78.7% 66.7%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.30e-01 78.7% 57.7%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.29e-01 78.7% 71.4%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.41e-01 78.7% 66.1%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.05e-01 78.7% 53.9%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.26e-01 78.7% 65.1%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.43e-01 76.6% 74.1%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.00e-01 85.1% 59.6%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 3.98e-01 100.0% 40.8%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 53.0 4.74e-01 100.0% 73.5%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.33e-01 100.0% 60.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.30e-01 91.5% 76.7%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.82e-01 78.7% 60.0%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.32e-01 91.5% 76.6%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.12e-01 85.1% 73.4%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 52.0 3.76e-01 100.0% 38.4%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.18e-01 100.0% 64.5%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 44.0 3.74e-01 85.1% 57.5%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 3.96e-01 97.9% 53.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 3.79e-01 100.0% 40.3%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.12e-01 100.0% 64.5%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 3.80e-01 100.0% 44.4%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.02e-01 100.0% 62.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 3.62e-01 100.0% 44.0%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 3.98e-01 97.9% 65.9%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 3.61e-01 100.0% 67.4%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.86e-01 85.1% 69.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 3.49e-01 100.0% 33.8%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 3.97e-01 97.9% 72.9%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.87e-01 91.5% 78.6%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.79e-01 100.0% 62.0%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 48.0 3.97e-01 100.0% 69.3%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 50.0 4.13e-01 100.0% 79.3%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.69e-01 100.0% 53.5%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.48e-01 100.0% 49.5%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 36.0 2.76e-01 72.3% 60.1%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.54 37.0 3.74e-01 95.7% 80.4%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.64e-01 97.9% 64.4%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.53 42.0 3.12e-01 100.0% 55.6%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.72e-01 100.0% 73.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.78e-01 100.0% 57.0%
1m3qA02 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.52 37.0 3.18e-01 89.4% 46.3%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.52 43.0 3.03e-01 100.0% 45.0%
2w82A03 1.10.10.1190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 0.51 42.0 3.96e-01 100.0% 93.5%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.51 41.0 3.01e-01 100.0% 34.6%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.51 39.0 2.72e-01 100.0% 29.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952885 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.93 84.0 8.21e-01 97.9% 98.0%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.93 85.0 8.04e-01 100.0% 89.1%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 78.0 7.73e-01 100.0% 98.0%
3589675 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 77.0 7.54e-01 97.9% 96.0%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.87 77.0 7.37e-01 100.0% 90.9%
4995042 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.85 73.0 6.06e-01 100.0% 58.8%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.84 73.0 7.22e-01 100.0% 98.0%
3587304 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 72.0 5.94e-01 100.0% 56.5%
4191032 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 69.0 6.84e-01 100.0% 96.0%
5000254 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 69.0 6.84e-01 100.0% 100.0%
3285399 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.78 64.0 6.33e-01 93.6% 92.0%
2325046 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 66.0 4.98e-01 100.0% 61.7%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 67.0 5.19e-01 100.0% 64.8%
3840108 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.76 67.0 6.18e-01 100.0% 81.7%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 65.0 5.51e-01 100.0% 83.7%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 64.0 4.78e-01 100.0% 53.6%
4951929 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 64.0 5.57e-01 100.0% 90.7%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 64.0 4.69e-01 100.0% 50.8%
3385701 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.75 63.0 6.06e-01 100.0% 90.9%
4470278 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 63.0 4.79e-01 97.9% 43.5%
3589820 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 63.0 4.66e-01 97.9% 41.6%
3286117 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 61.0 4.60e-01 100.0% 53.6%
3278826 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 61.0 4.60e-01 97.9% 40.8%
4674139 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.71 59.0 4.42e-01 100.0% 44.6%
3238512 101.1.9.23 alpha arrays › HTH › HTH › Putative DNA-binding domain › TdIF1_2nd 0.66 52.0 4.13e-01 95.7% 56.4%
4472807 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.64 56.0 4.73e-01 100.0% 62.5%
3927026 101.1.1.195 alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 0.63 46.0 3.77e-01 74.5% 42.4%
3413561 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.62 43.0 3.48e-01 78.7% 45.7%
4100614 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 51.0 4.90e-01 97.9% 85.5%
3579672 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.61 53.0 5.06e-01 97.9% 92.7%
4404011 101.15.1.1 alpha arrays › HTH › LysM domain › LysM domain › LysM 0.60 45.0 3.97e-01 95.7% 54.3%
2892669 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.60 51.0 4.20e-01 97.9% 55.7%
4158216 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.59 48.0 4.56e-01 100.0% 83.3%
5028701 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.36e-01 97.9% 77.1%
4961645 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.58 49.0 4.07e-01 100.0% 61.1%
3325524 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.58 48.0 4.62e-01 97.9% 89.1%
3664931 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.58 48.0 4.74e-01 97.9% 96.0%
4210562 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.58 45.0 4.27e-01 95.7% 76.7%
4952731 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.57 48.0 3.87e-01 100.0% 55.0%
3366705 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 50.0 4.51e-01 100.0% 80.0%
4456623 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.56 45.0 3.15e-01 100.0% 37.4%
3587301 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 4.27e-01 100.0% 75.4%
4953298 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.56 47.0 3.50e-01 100.0% 42.3%
3947025 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.53 43.0 3.01e-01 95.7% 63.1%
4947375 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.60e-01 100.0% 68.8%
4933514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.07e-01 100.0% 90.7%
4332395 2003.1.2.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.51 40.0 2.70e-01 100.0% 27.8%
4977854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 3.27e-01 87.2% 83.5%
5077428 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.44e-01 100.0% 75.6%
4988748 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.51 42.0 3.52e-01 100.0% 76.7%
4956464 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.36e-01 91.5% 70.6%
197596 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.43e-01 100.0% 71.8%
4995114 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.33e-01 100.0% 72.6%