←Back to structures
MW677511.1__QXN71059.1__RCDURKIN_3__00003
Bact-VirMW677511.1__QXN71059.1__RCDURKIN_3__00003
Identity
- Accession:
- MW677511 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.19e-01 | 93.9% | 63.5% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.53 | 38.0 | 3.51e-01 | 79.6% | 66.7% |
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.53 | 39.0 | 2.86e-01 | 89.8% | 48.8% |
| 1sjyA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 40.0 | 3.08e-01 | 100.0% | 54.5% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 40.0 | 2.51e-01 | 89.8% | 85.1% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.50 | 34.0 | 3.03e-01 | 73.5% | 43.2% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 2.91e-01 | 91.8% | 40.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3490755 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.59 | 40.0 | 4.37e-01 | 77.6% | 87.5% |
| 3538421 | 376.1.3.69 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-RING_Vps41 | 0.57 | 37.0 | 3.51e-01 | 100.0% | 53.3% |
| 3212396 | 221.1.1.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX | 0.57 | 47.0 | 4.12e-01 | 100.0% | 95.0% |
| 4476444 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.55 | 37.0 | 3.65e-01 | 77.6% | 63.6% |
| 3238188 | 221.1.1.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX | 0.55 | 45.0 | 3.90e-01 | 100.0% | 89.4% |
| 3515746 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.53 | 38.0 | 2.75e-01 | 79.6% | 53.1% |
| 4981036 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 34.0 | 3.52e-01 | 91.8% | 75.6% |
| 3261385 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 33.0 | 3.52e-01 | 75.5% | 80.0% |