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MW677529.1QXN72663.1RCZAHN_54__00054

Bact-Vir

MW677529.1__QXN72663.1__RCZAHN_54__00054

Identity

Accession:: MW677529 ↗
Kingdom:: phage

Quality

72.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodobacter_phage_RcZahn

TaxID: 2835984

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 66-128

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.80	55.0	4.50e-01	71.4%	65.1%
5d8nA01	3.40.220.10	Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1	0.69	40.0	2.82e-01	81.0%	19.7%
3bjoA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	50.0	4.28e-01	84.1%	100.0%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.63	54.0	4.48e-01	92.1%	71.7%
4ciuA04	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.61	43.0	3.84e-01	77.8%	50.5%
4ddpA00	1.10.418.40	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1	0.60	46.0	3.22e-01	82.5%	40.5%
1i5eA00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.59	45.0	3.11e-01	81.0%	34.6%
2e55A00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.59	43.0	3.04e-01	79.4%	34.6%
6l2cB00	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.57	43.0	2.61e-01	79.4%	49.6%
2wpvE00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.56	38.0	2.45e-01	71.4%	19.3%
2v1nA01	1.10.10.2030	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain	0.55	39.0	3.34e-01	74.6%	79.2%
3k44B00	3.30.2450.30	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.54	43.0	3.33e-01	87.3%	72.1%
3cjeA00	3.30.300.20	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain	0.53	43.0	3.21e-01	87.3%	49.3%
1cl8A00	3.40.580.10	Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A	0.52	41.0	2.73e-01	87.3%	41.8%
4xaaA00	2.60.120.620	Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain	0.52	38.0	2.64e-01	79.4%	42.5%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3392569	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.82	58.0	4.47e-01	88.9%	36.8%
5000798	3926.1.1.1 ↗	alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D	0.82	58.0	3.99e-01	73.0%	58.9%
3550136	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.78	57.0	4.59e-01	76.2%	61.7%
3579472	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.77	57.0	4.39e-01	77.8%	53.1%
3712081	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.74	57.0	4.66e-01	81.0%	60.9%
3935332	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.72	55.0	4.28e-01	81.0%	51.5%
3603208	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.72	49.0	4.78e-01	71.4%	64.3%
3828334	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.70	38.0	2.42e-01	71.4%	11.4%
4184822	2002.1.1.69 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MM_CoA_mutase	0.69	56.0	3.18e-01	96.8%	8.5%
3198423	5000.6.1.0 ↗	alpha arrays › Toxins' membrane translocation domains › Tethering factor for nuclear proteasome cut8 › Tethering factor for nuclear proteasome cut8	0.68	57.0	3.85e-01	88.9%	40.5%
3586018	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.68	57.0	4.30e-01	88.9%	70.7%
3482328	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.66	56.0	4.66e-01	90.5%	72.4%
4017372	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.65	54.0	4.36e-01	90.5%	71.3%
4025452	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.63	55.0	4.45e-01	95.2%	68.7%
4992192	192.20.1.0 ↗	alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD	0.63	56.0	4.85e-01	98.4%	65.3%
4662222	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.62	51.0	4.14e-01	90.5%	55.0%
3228583	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.61	53.0	4.31e-01	95.2%	62.6%
3803650	109.4.1.1335 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif	0.60	42.0	2.42e-01	74.6%	15.1%
3341083	109.4.1.728 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.58	51.0	3.22e-01	96.8%	41.2%
3340500	109.4.1.883 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2	0.51	40.0	2.50e-01	82.5%	32.1%
3466671	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.51	42.0	2.78e-01	100.0%	48.8%

D2 medium residues 134-192

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3775164	109.4.1.1871 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi, PF26720	0.59	45.0	2.82e-01	86.4%	61.6%