Back to structures

MW677529.1__QXN72683.1__RCZAHN_74__00074

Bact-Vir

MW677529.1__QXN72683.1__RCZAHN_74__00074

Identity

Accession:
MW677529 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-112
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bu0A01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.84 56.0 5.98e-01 70.5% 77.6%
3u3zA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.83 55.0 5.97e-01 70.5% 78.4%
3al2A01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.82 55.0 5.35e-01 70.5% 62.6%
2nteB01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.80 54.0 5.73e-01 70.5% 77.8%
3oq0J00 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.77 54.0 5.84e-01 71.4% 100.0%
6j0yA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.68 55.0 5.84e-01 84.8% 94.1%
2duwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 47.0 4.36e-01 70.5% 91.2%
3t7iA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.67 47.0 4.57e-01 71.4% 65.6%
1lhpA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 48.0 3.52e-01 75.9% 93.8%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.65 49.0 3.68e-01 78.6% 94.8%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.65 46.0 3.87e-01 72.3% 87.3%
3d54D00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.64 44.0 3.58e-01 70.5% 94.8%
4py9A01 3.90.1640.10 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) 0.64 50.0 4.06e-01 83.9% 72.9%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 44.0 4.07e-01 71.4% 89.0%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 48.0 3.54e-01 78.6% 91.0%
2ywrA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.63 43.0 3.49e-01 70.5% 100.0%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 43.0 3.97e-01 70.5% 96.6%
4s1hA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.63 46.0 3.43e-01 76.8% 90.6%
1jvnA01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.62 43.0 3.36e-01 70.5% 85.4%
3d02A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 43.0 3.92e-01 71.4% 90.5%
6h0cA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 43.0 3.91e-01 73.2% 88.8%
1jxhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.60 45.0 3.53e-01 78.6% 94.0%
4kqcA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 42.0 3.80e-01 76.8% 97.5%
4inoA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.58 41.0 3.86e-01 73.2% 87.5%
4hn9A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.57 39.0 3.74e-01 70.5% 85.4%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.30e-01 90.2% 85.1%
7ntgA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 45.0 3.90e-01 94.6% 85.9%
4b28A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.52 38.0 3.16e-01 75.0% 70.4%
1nvmB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 38.0 3.34e-01 75.0% 65.8%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 3.43e-01 74.1% 88.6%
1yw6B00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.50 43.0 3.18e-01 94.6% 84.4%
5cjjB00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.50 37.0 3.11e-01 77.7% 76.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3278734 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.91 64.0 7.16e-01 71.4% 94.3%
4460512 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.89 57.0 6.80e-01 71.4% 91.3%
4083883 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.89 57.0 6.73e-01 73.2% 91.3%
4308622 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.86 57.0 6.73e-01 70.5% 95.0%
3904888 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.85 55.0 6.53e-01 70.5% 92.5%
3183466 7568.1.1.12 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › DBF4_BRCT 0.85 55.0 5.73e-01 70.5% 70.5%
4015594 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.84 56.0 5.59e-01 70.5% 66.1%
3781702 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.83 55.0 5.88e-01 70.5% 76.0%
4001966 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.83 57.0 5.65e-01 70.5% 67.8%
4260626 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.82 59.0 6.42e-01 74.1% 93.7%
4136176 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.82 56.0 6.42e-01 72.3% 92.9%
3743319 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.81 53.0 5.67e-01 71.4% 75.0%
3824528 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.80 58.0 6.20e-01 74.1% 98.0%
3794833 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.77 51.0 3.97e-01 70.5% 32.3%
3927523 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.74 54.0 5.20e-01 75.0% 93.6%
3739927 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.74 58.0 5.82e-01 84.8% 79.1%
3623593 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.73 57.0 5.22e-01 84.8% 64.3%
3772733 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.72 56.0 5.31e-01 84.8% 69.2%
4021765 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.72 58.0 5.63e-01 83.9% 77.5%
3465970 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.71 57.0 6.05e-01 89.3% 93.0%
3573818 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.71 58.0 5.51e-01 88.4% 73.8%
3661641 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.70 56.0 5.91e-01 87.5% 92.0%
1682848 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.70 57.0 5.90e-01 86.6% 90.5%
3380599 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.69 54.0 5.86e-01 87.5% 96.8%
3629443 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.68 58.0 6.06e-01 88.4% 94.3%
3789691 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.68 59.0 5.72e-01 89.3% 84.2%
3183357 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.66 56.0 5.09e-01 88.4% 73.1%
3233273 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.66 57.0 5.31e-01 92.0% 74.8%
4541705 2007.1.3.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 0.65 49.0 4.71e-01 79.5% 98.5%