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MW677529.1__QXN72688.1__RCZAHN_79__00079

Bact-Vir

MW677529.1__QXN72688.1__RCZAHN_79__00079

Identity

Accession:
MW677529 ↗
Kingdom:
phage

Quality

82.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodobacter_phage_RcZahn

TaxID: 2835984

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-185
PDB
Domain cluster: rep: NC_001416.1__NP_040606.1__lambdap80__00027__D230-408
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 25.0 3.83e-01 74.7% 81.6%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 35.0 4.53e-01 80.8% 91.3%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.63 33.0 4.60e-01 74.7% 100.0%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 32.0 4.41e-01 74.7% 97.9%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.58 25.0 3.40e-01 71.4% 78.7%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.53 26.0 3.33e-01 71.4% 80.8%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 29.0 3.26e-01 77.5% 68.3%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 23.0 3.01e-01 75.8% 75.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289401 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.83 55.0 6.49e-01 84.1% 93.8%
3449021 109.4.1.1734 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_11 0.73 60.0 4.86e-01 87.4% 48.1%
3659427 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.72 60.0 4.55e-01 86.8% 40.0%
3807375 109.4.1.1306 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11 0.72 59.0 4.81e-01 87.4% 48.6%
4784456 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.70 22.0 3.94e-01 75.3% 87.9%
4639080 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 35.0 4.12e-01 79.1% 70.8%
5071733 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.60 25.0 3.36e-01 79.7% 72.2%
4025923 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 24.0 3.43e-01 73.1% 87.5%
3742459 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.54 27.0 3.55e-01 75.8% 86.0%
4983588 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 21.0 3.14e-01 74.7% 85.3%
3966459 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 26.0 2.97e-01 74.7% 60.0%
3414280 11.1.1.191 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM39 0.51 29.0 3.79e-01 74.7% 100.0%
3793090 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 41.0 3.21e-01 86.3% 98.8%
4064064 243.5.1.1 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.50 27.0 3.35e-01 79.1% 82.6%