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MW712735.1__QWY81373.1__SEA_RIZWANA_76__00076
Bact-VirMW712735.1__QWY81373.1__SEA_RIZWANA_76__00076
Identity
- Accession:
- MW712735 ↗
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Taxonomy
TaxID: 2836008
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-76
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zczA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.70 | 43.0 | 3.70e-01 | 100.0% | 39.3% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.70 | 52.0 | 4.97e-01 | 80.0% | 95.5% |
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.69 | 58.0 | 4.54e-01 | 96.0% | 57.3% |
| 4ehiA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.67 | 41.0 | 3.25e-01 | 100.0% | 29.5% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.66 | 51.0 | 3.43e-01 | 84.0% | 88.9% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 3.69e-01 | 100.0% | 47.8% |
| 5xgbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 42.0 | 3.29e-01 | 76.0% | 68.7% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.60 | 53.0 | 5.26e-01 | 100.0% | 98.7% |
| 3n0aA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 4.20e-01 | 100.0% | 98.5% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 42.0 | 3.90e-01 | 78.7% | 86.3% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 40.0 | 3.38e-01 | 74.7% | 46.3% |
| 7n0eB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 40.0 | 3.43e-01 | 76.0% | 68.0% |
| 1bdyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 48.0 | 4.14e-01 | 100.0% | 92.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 44.0 | 3.48e-01 | 88.0% | 95.8% |
| 3jz3B01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 40.0 | 3.25e-01 | 78.7% | 89.9% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 37.0 | 3.45e-01 | 74.7% | 55.7% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 45.0 | 3.65e-01 | 100.0% | 49.3% |
| 1k92A02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.54 | 45.0 | 3.31e-01 | 94.7% | 87.0% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.54 | 37.0 | 3.67e-01 | 73.3% | 73.2% |
| 2n0kA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.81e-01 | 82.7% | 68.5% |
| 5d1oA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.53 | 42.0 | 4.28e-01 | 90.7% | 100.0% |
| 4ggmX02 | 3.40.140.80 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain | 0.52 | 38.0 | 3.07e-01 | 77.3% | 94.7% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.79e-01 | 77.3% | 81.1% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.03e-01 | 78.7% | 91.9% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 39.0 | 3.94e-01 | 100.0% | 82.7% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.92e-01 | 94.7% | 74.7% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 41.0 | 2.96e-01 | 90.7% | 82.4% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 37.0 | 3.41e-01 | 78.7% | 98.0% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 43.0 | 3.11e-01 | 100.0% | 80.8% |
| 7cluA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 37.0 | 2.62e-01 | 76.0% | 74.6% |
| 2j8hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.75e-01 | 90.7% | 92.8% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 39.0 | 4.13e-01 | 89.3% | 95.6% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.50 | 40.0 | 4.11e-01 | 89.3% | 91.8% |
| 2o0yB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 43.0 | 3.38e-01 | 100.0% | 54.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977753 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.74 | 58.0 | 3.92e-01 | 85.3% | 92.3% |
| 4263383 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.72 | 56.0 | 3.81e-01 | 85.3% | 98.6% |
| 3803779 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.72 | 37.0 | 3.78e-01 | 90.7% | 50.7% |
| 4959212 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.69 | 49.0 | 3.45e-01 | 74.7% | 48.9% |
| 3935205 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.67 | 59.0 | 5.09e-01 | 100.0% | 66.7% |
| 4967463 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.62 | 50.0 | 4.24e-01 | 89.3% | 68.8% |
| 3738629 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 51.0 | 4.39e-01 | 100.0% | 92.0% |
| 5038088 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.58 | 41.0 | 4.32e-01 | 98.7% | 84.6% |
| 3320048 | 109.4.1.1371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif | 0.57 | 39.0 | 2.69e-01 | 72.0% | 24.2% |
| 3830475 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 38.0 | 3.58e-01 | 73.3% | 57.8% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 40.0 | 3.04e-01 | 76.0% | 48.1% |
| 3206066 | 327.19.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain | 0.56 | 41.0 | 3.60e-01 | 77.3% | 100.0% |
| 4673811 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.56 | 40.0 | 3.85e-01 | 77.3% | 69.7% |
| 159493 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 47.0 | 3.98e-01 | 100.0% | 91.4% |
| 3616815 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.55 | 35.0 | 3.89e-01 | 85.3% | 81.7% |
| 4300927 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 39.0 | 3.44e-01 | 76.0% | 55.7% |
| 3429644 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 38.0 | 3.03e-01 | 72.0% | 76.9% |
| 3660352 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 33.0 | 2.89e-01 | 97.3% | 34.6% |
| 3434168 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.55 | 45.0 | 4.09e-01 | 93.3% | 99.0% |
| 4261231 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 39.0 | 3.47e-01 | 77.3% | 60.0% |
| 1031012 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.54 | 45.0 | 3.56e-01 | 100.0% | 46.3% |
| 4031089 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.53 | 39.0 | 2.79e-01 | 81.3% | 74.3% |
| 4972219 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.53 | 37.0 | 3.75e-01 | 90.7% | 73.3% |
| 4447510 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.53 | 40.0 | 3.28e-01 | 82.7% | 66.0% |
| 3725516 | 10.12.1.12 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD | 0.53 | 40.0 | 2.59e-01 | 82.7% | 40.3% |
| 4998406 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.53 | 37.0 | 3.72e-01 | 76.0% | 77.5% |
| 4343880 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.53 | 41.0 | 3.98e-01 | 98.7% | 75.3% |
| 4520138 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.52 | 41.0 | 3.59e-01 | 88.0% | 85.0% |
| 4954690 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 46.0 | 3.35e-01 | 100.0% | 60.3% |
| 4113722 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.52 | 41.0 | 3.88e-01 | 97.3% | 70.5% |
| 3991824 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 43.0 | 4.21e-01 | 94.7% | 82.4% |
| 5003527 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.52 | 44.0 | 3.50e-01 | 100.0% | 46.7% |
| 4033865 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.52 | 43.0 | 3.51e-01 | 100.0% | 48.3% |
| 3473575 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.51 | 43.0 | 4.29e-01 | 100.0% | 88.7% |
| 3211790 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.51 | 40.0 | 4.00e-01 | 97.3% | 86.7% |
| 4633797 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 39.0 | 3.87e-01 | 85.3% | 92.5% |
| 4654074 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.50 | 35.0 | 3.34e-01 | 73.3% | 61.1% |
| 3619798 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.50 | 40.0 | 3.41e-01 | 97.3% | 51.5% |
| 4448399 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.50 | 37.0 | 2.60e-01 | 81.3% | 82.1% |
| 5013983 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.50 | 38.0 | 3.32e-01 | 82.7% | 88.3% |