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MW722083.1__QTH80040.1__X__00030

Bact-Vir

MW722083.1__QTH80040.1__X__00030

Identity

Accession:
MW722083 ↗
Kingdom:
phage

Quality

77.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Uetakevirus› Escherichia_phage_vB_EcoP_ZX5

TaxID: 2820396

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 138-195
PDB
Domain cluster: rep: OX241558.1__CAH9015106.1__VP511E551_P0014__00014__D5-60
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04448.18 best DUF551 56.1 7.70e-15 100.0% 88.2%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 49.0 3.82e-01 86.2% 63.4%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.60 45.0 3.63e-01 84.5% 70.2%
4b0eD00 3.10.20.410 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain 0.59 45.0 3.93e-01 87.9% 80.0%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 51.0 4.04e-01 100.0% 51.2%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.59 50.0 4.17e-01 100.0% 73.0%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 42.0 3.39e-01 79.3% 69.5%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.69e-01 84.5% 88.0%
1wb1A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 47.0 3.91e-01 96.6% 66.7%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.75e-01 84.5% 77.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.22e-01 93.1% 77.1%
2wyrB02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.57 48.0 4.36e-01 100.0% 100.0%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.60e-01 84.5% 70.1%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.65e-01 91.4% 94.8%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.44e-01 86.2% 65.1%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.56 49.0 3.65e-01 100.0% 60.4%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 2.95e-01 79.3% 63.9%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 45.0 3.92e-01 100.0% 100.0%
2hcjB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 45.0 4.01e-01 100.0% 92.6%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.51e-01 84.5% 76.9%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.55 46.0 3.61e-01 96.6% 81.2%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 46.0 4.11e-01 96.6% 69.0%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.54e-01 86.2% 85.7%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.39e-01 96.6% 100.0%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 41.0 3.18e-01 84.5% 74.5%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.41e-01 98.3% 97.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.05e-01 96.6% 81.8%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 45.0 3.94e-01 96.6% 71.7%
3wndA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 43.0 3.85e-01 96.6% 73.4%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.54 42.0 3.72e-01 89.7% 100.0%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 43.0 3.77e-01 91.4% 63.3%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.52 40.0 3.45e-01 84.5% 80.0%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 36.0 3.03e-01 77.6% 48.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 43.0 4.23e-01 96.6% 100.0%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.00e-01 74.1% 70.9%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.44e-01 84.5% 84.9%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 42.0 3.58e-01 100.0% 87.7%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 39.0 2.93e-01 91.4% 68.5%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 5.12e-01 84.5% 90.9%
3824699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 51.0 4.94e-01 91.4% 90.8%
4295861 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.61 47.0 4.86e-01 98.3% 92.7%
3253077 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 46.0 3.61e-01 84.5% 68.1%
3513063 1.1.8.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C 0.60 50.0 3.81e-01 96.6% 48.0%
3238955 4.1.1.377 ↗ beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.60 50.0 4.56e-01 94.8% 80.0%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.04e-01 98.3% 79.1%
3478898 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.58e-01 89.7% 83.1%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.59 42.0 3.92e-01 81.0% 80.0%
3777835 1.1.8.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C 0.58 50.0 3.10e-01 100.0% 60.3%
3596672 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 51.0 3.82e-01 100.0% 67.6%
3387846 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.58 49.0 3.96e-01 100.0% 72.5%
4519252 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.58 49.0 4.00e-01 98.3% 73.9%
3504760 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.58 47.0 4.20e-01 96.6% 66.7%
3909439 220.1.1.40 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › OCRL_clath_bd 0.57 44.0 3.59e-01 84.5% 79.1%
3385440 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 49.0 4.42e-01 96.6% 72.5%
2797459 220.1.1.3 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1,Retinal 0.56 44.0 3.59e-01 86.2% 76.1%
4961770 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 39.0 3.20e-01 77.6% 74.4%
3309980 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.56 45.0 3.50e-01 96.6% 60.7%
4317931 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 45.0 4.11e-01 96.6% 74.1%
2697431 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.55 43.0 3.55e-01 86.2% 79.6%
4098005 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.55 46.0 4.12e-01 100.0% 96.7%
3805766 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.55 42.0 4.34e-01 86.2% 100.0%
3288253 1.1.13.55 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 0.55 43.0 3.77e-01 87.9% 83.3%
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 46.0 3.85e-01 100.0% 64.5%
3606476 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.54 39.0 3.98e-01 77.6% 98.2%
5035411 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 43.0 3.68e-01 100.0% 78.3%
4514946 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 39.0 2.73e-01 77.6% 69.7%
3172792 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.54 44.0 3.79e-01 100.0% 95.2%
4553723 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.53 44.0 3.87e-01 100.0% 88.4%
3471771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.22e-01 91.4% 100.0%
4083333 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.53 43.0 3.84e-01 100.0% 85.3%
4656452 1.1.13.63 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Queuosine_synth 0.52 39.0 3.12e-01 86.2% 37.7%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.52 41.0 3.94e-01 96.6% 84.0%
4073606 3703.1.1.0 ↗ a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain 0.51 43.0 2.97e-01 100.0% 53.9%
3831707 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.50 38.0 2.39e-01 84.5% 96.9%
3289119 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 37.0 2.35e-01 84.5% 88.3%
3244334 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.33e-01 93.1% 73.3%
D2 medium residues 6-76
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.57 40.0 2.40e-01 73.2% 74.6%
1zhhB01 3.30.450.220 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain 0.53 39.0 3.03e-01 78.9% 86.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.52 38.0 2.69e-01 78.9% 58.8%
3788504 5061.1.1.2 ↗ alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY,Plug_translocon 0.51 41.0 2.63e-01 98.6% 44.3%
5007991 223.1.1.23 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.51 39.0 3.19e-01 83.1% 88.5%
4990106 5061.1.1.1 ↗ alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY 0.51 41.0 2.54e-01 91.5% 30.4%
3437593 5061.1.1.2 ↗ alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY,Plug_translocon 0.51 41.0 2.54e-01 90.1% 30.3%
4988906 5061.1.1.1 ↗ alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY 0.50 43.0 2.67e-01 97.2% 84.9%