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MW725301.1__QVW27697.1__PSDA2_00063__00063
Bact-VirMW725301.1__QVW27697.1__PSDA2_00063__00063
Identity
- Accession:
- MW725301 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 2831171
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 43.0 | 4.46e-01 | 73.8% | 90.3% |
| 1hskA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 49.0 | 4.04e-01 | 93.8% | 79.5% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.59 | 46.0 | 4.09e-01 | 84.6% | 82.8% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 46.0 | 4.04e-01 | 87.7% | 97.9% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 39.0 | 3.11e-01 | 72.3% | 43.2% |
| 4l1dC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.67e-01 | 84.6% | 83.5% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 44.0 | 3.80e-01 | 90.8% | 86.0% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 45.0 | 3.86e-01 | 90.8% | 70.2% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.55 | 43.0 | 3.81e-01 | 84.6% | 96.8% |
| 3lwkA02 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.54 | 45.0 | 4.03e-01 | 92.3% | 74.7% |
| 2v1yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 41.0 | 3.81e-01 | 86.2% | 94.4% |
| 5l0qB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.65e-01 | 89.2% | 80.6% |
| 1wi0A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 44.0 | 3.72e-01 | 93.8% | 82.3% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.65e-01 | 92.3% | 56.6% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 39.0 | 3.62e-01 | 78.5% | 79.8% |
| 6jifA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.53 | 44.0 | 3.25e-01 | 92.3% | 69.8% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 41.0 | 3.77e-01 | 84.6% | 88.4% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.53 | 40.0 | 3.86e-01 | 84.6% | 100.0% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 4.05e-01 | 75.4% | 98.2% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.68e-01 | 98.5% | 73.8% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.40e-01 | 95.4% | 65.4% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 43.0 | 3.55e-01 | 95.4% | 80.8% |
| 5e44A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 44.0 | 3.54e-01 | 100.0% | 78.1% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 44.0 | 3.66e-01 | 100.0% | 70.5% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.80e-01 | 84.6% | 87.5% |
| 4ev0D01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.50e-01 | 98.5% | 66.4% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.45e-01 | 98.5% | 62.6% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 39.0 | 3.35e-01 | 84.6% | 72.6% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.38e-01 | 96.9% | 79.7% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.44e-01 | 90.8% | 78.0% |
| 2orzA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.36e-01 | 96.9% | 76.6% |
| 2zcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.62e-01 | 93.8% | 74.1% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 43.0 | 3.04e-01 | 93.8% | 33.3% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.56e-01 | 100.0% | 58.7% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.46e-01 | 89.2% | 82.1% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 38.0 | 3.10e-01 | 81.5% | 91.0% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 3.04e-01 | 86.2% | 44.5% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.51 | 39.0 | 3.67e-01 | 87.7% | 97.6% |
| 2orzA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.25e-01 | 96.9% | 56.0% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.50 | 35.0 | 3.48e-01 | 76.9% | 98.6% |
| 3h8hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 40.0 | 3.63e-01 | 90.8% | 88.0% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.43e-01 | 100.0% | 82.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729046 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 49.0 | 3.00e-01 | 96.9% | 69.5% |
| 4826815 | 10.1.1.14 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CoV_S1 | 0.57 | 46.0 | 3.44e-01 | 90.8% | 76.4% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.57 | 44.0 | 4.41e-01 | 83.1% | 95.4% |
| 1873068 | 231.1.1.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_1 | 0.57 | 39.0 | 2.57e-01 | 70.8% | 31.6% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.57 | 46.0 | 4.22e-01 | 89.2% | 81.2% |
| 3256005 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.60e-01 | 83.1% | 68.7% |
| 3619202 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.57 | 41.0 | 3.82e-01 | 78.5% | 77.6% |
| 2141870 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.56 | 46.0 | 3.10e-01 | 95.4% | 42.0% |
| 4322758 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.55 | 45.0 | 3.74e-01 | 100.0% | 66.7% |
| 3895575 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 42.0 | 3.63e-01 | 86.2% | 84.5% |
| 3860541 | 72.1.1.1 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall | 0.55 | 45.0 | 4.14e-01 | 92.3% | 75.3% |
| 4958701 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.54 | 37.0 | 2.97e-01 | 72.3% | 88.9% |
| 3469360 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.54 | 40.0 | 3.83e-01 | 81.5% | 92.5% |
| 3344222 | 1.1.2.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP | 0.54 | 45.0 | 3.90e-01 | 96.9% | 97.3% |
| 3938023 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.91e-01 | 95.4% | 88.0% |
| 3957686 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.53 | 42.0 | 3.59e-01 | 92.3% | 89.2% |
| 4941983 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 45.0 | 3.59e-01 | 98.5% | 72.1% |
| 1554319 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 43.0 | 3.40e-01 | 95.4% | 65.0% |
| 4231368 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.53 | 42.0 | 3.18e-01 | 95.4% | 80.5% |
| 4484119 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.53 | 41.0 | 3.10e-01 | 90.8% | 58.2% |
| 3953335 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.52 | 41.0 | 3.61e-01 | 92.3% | 90.9% |
| 3227155 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 45.0 | 3.75e-01 | 96.9% | 64.3% |
| 4011206 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.52 | 40.0 | 2.81e-01 | 90.8% | 45.1% |
| 3952579 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.52 | 41.0 | 3.04e-01 | 93.8% | 75.2% |
| 3587438 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 44.0 | 3.57e-01 | 100.0% | 70.4% |
| 5040615 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.52 | 44.0 | 3.62e-01 | 96.9% | 61.6% |
| 4009311 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.52 | 43.0 | 4.36e-01 | 90.8% | 100.0% |
| 4959054 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.33e-01 | 73.8% | 65.9% |
| 3648584 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 41.0 | 3.39e-01 | 87.7% | 55.9% |
| 3943690 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 38.0 | 4.02e-01 | 78.5% | 93.1% |
| 3664925 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.51 | 39.0 | 3.28e-01 | 89.2% | 60.0% |
| 3935683 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.51 | 42.0 | 2.88e-01 | 95.4% | 49.8% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 41.0 | 3.61e-01 | 89.2% | 96.0% |
| 5003481 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 43.0 | 3.39e-01 | 98.5% | 81.3% |
| 3075186 | 3857.1.1.1 ↗ | beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding | 0.51 | 37.0 | 3.18e-01 | 78.5% | 77.5% |
| 3718766 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.51 | 42.0 | 3.47e-01 | 100.0% | 64.4% |
| 3801941 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 37.0 | 3.17e-01 | 80.0% | 72.2% |
| 3224349 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 41.0 | 3.67e-01 | 90.8% | 73.7% |