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MW735835.1__QTH80245.1__PA10_00045__00045

Bact-Vir

MW735835.1__QTH80245.1__PA10_00045__00045

Identity

Accession:
MW735835 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_pPa_SNUABM_DT01

TaxID: 2820398

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-64
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3knvA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 44.0 3.55e-01 83.6% 86.2%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 47.0 3.71e-01 95.1% 92.1%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 40.0 3.39e-01 82.0% 99.1%
8e9gD01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.54 41.0 2.55e-01 85.2% 80.6%
2m0pA00 4.10.400.10 Few Secondary Structures › Irregular › Low-density Lipoprotein Receptor › Low-density Lipoprotein Receptor 0.53 34.0 3.76e-01 72.1% 84.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3402153 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 36.0 3.60e-01 77.0% 58.5%
3550923 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 42.0 3.33e-01 80.3% 71.9%
4448380 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.55 47.0 3.78e-01 95.1% 96.7%
3929651 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.55 38.0 3.07e-01 70.5% 50.4%
3403338 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.55 40.0 3.83e-01 80.3% 81.3%
3335696 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.54 40.0 3.21e-01 80.3% 48.8%
None — 0.54 41.0 3.68e-01 82.0% 78.8%
3213253 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 37.0 2.82e-01 77.0% 78.9%
3234037 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.53 41.0 3.40e-01 88.5% 91.7%
3585040 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 38.0 3.43e-01 78.7% 85.4%
3785583 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.51 41.0 3.39e-01 93.4% 92.5%