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MW735835.1__QTH80299.1__PA10_00099__00099

Bact-Vir

MW735835.1__QTH80299.1__PA10_00099__00099

Identity

Accession:
MW735835 ↗
Kingdom:
phage

Quality

54.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_pPa_SNUABM_DT01

TaxID: 2820398

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-133
PDB
D2 medium residues 167-208_244-352
PDB
D3 medium residues 209-243_353-414
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.60 36.0 4.27e-01 83.5% 89.2%
2o1eB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.56 46.0 3.93e-01 87.6% 92.1%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.53 48.0 4.53e-01 99.0% 99.1%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4020958 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 47.0 3.23e-01 70.1% 32.6%
3786750 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.69 50.0 4.86e-01 74.2% 94.2%
3737182 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.66 57.0 4.93e-01 94.8% 64.0%
2889550 4995.1.1.0 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like 0.65 50.0 5.37e-01 81.4% 92.9%
4956162 4995.1.1.0 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like 0.62 43.0 4.82e-01 74.2% 90.7%
3997708 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 4.46e-01 86.6% 88.1%
4154382 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.62 50.0 4.00e-01 83.5% 59.5%
3542934 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.61 55.0 4.14e-01 100.0% 78.7%
4616182 5054.1.1.17 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TRAM_LAG1_CLN8 0.61 55.0 4.13e-01 100.0% 78.7%
5074225 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.58 48.0 4.96e-01 85.6% 97.8%
3516673 601.33.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › PPP1R21_helical 0.57 52.0 4.37e-01 100.0% 80.0%
4211428 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.57 51.0 4.26e-01 99.0% 95.9%
3653311 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 40.0 3.62e-01 75.3% 55.6%
3610184 375.1.9.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase 0.56 43.0 4.05e-01 83.5% 84.2%
3286501 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 42.0 3.70e-01 84.5% 93.1%
3270709 109.4.1.15 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.52 39.0 3.45e-01 80.4% 53.1%
3526105 604.3.1.18 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27519 0.51 41.0 4.23e-01 85.6% 94.4%
3464750 109.4.1.1369 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3, MIF4G 0.51 45.0 2.90e-01 100.0% 53.0%