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MW735835.1__QTH80459.1__PA10_00261__00259

Bact-Vir

MW735835.1__QTH80459.1__PA10_00261__00259

Identity

Accession:
MW735835 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_pPa_SNUABM_DT01

TaxID: 2820398

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-173
PDB
Domain cluster: rep: NC_007149.1__YP_249596.1__VVP4_p28__00028__D493-632
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 44.0 5.03e-01 100.0% 79.0%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.70 44.0 4.89e-01 100.0% 79.1%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.68 53.0 5.80e-01 91.2% 97.4%
3fcsA03 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.67 45.0 4.50e-01 100.0% 66.9%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.65 46.0 4.21e-01 100.0% 55.2%
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 41.0 4.81e-01 97.1% 95.6%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.62 55.0 5.08e-01 96.3% 95.9%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 4.78e-01 100.0% 80.0%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 35.0 4.12e-01 88.2% 82.0%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 42.0 4.40e-01 86.8% 75.4%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 39.0 4.52e-01 96.3% 91.6%
3vmnA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 44.0 4.40e-01 86.0% 73.2%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 43.0 4.23e-01 100.0% 69.2%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 42.0 3.99e-01 72.8% 84.7%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.58 43.0 4.30e-01 100.0% 73.6%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 42.0 4.05e-01 100.0% 66.7%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.57 42.0 3.99e-01 100.0% 62.9%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 4.25e-01 100.0% 66.5%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 4.42e-01 100.0% 68.8%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 4.47e-01 100.0% 88.5%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 3.71e-01 100.0% 39.7%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 4.54e-01 99.3% 99.1%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 3.90e-01 100.0% 62.7%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.54 47.0 4.58e-01 100.0% 86.6%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.54 45.0 4.18e-01 91.9% 97.7%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.54 42.0 3.98e-01 93.4% 68.5%
1j1tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.79e-01 91.2% 99.1%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.53 44.0 3.97e-01 100.0% 64.2%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 45.0 4.29e-01 91.2% 96.2%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 4.31e-01 97.8% 95.4%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.15e-01 91.9% 90.3%
1t4wA00 2.60.40.720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.98e-01 100.0% 63.3%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 44.0 4.56e-01 90.4% 100.0%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.17e-01 97.1% 94.1%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.53 44.0 3.97e-01 90.4% 92.6%
2mizA00 2.60.40.2900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 4.45e-01 96.3% 94.2%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.52 44.0 4.39e-01 91.2% 95.7%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 43.0 3.54e-01 90.4% 86.7%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 4.16e-01 88.2% 98.0%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.51 35.0 3.52e-01 97.1% 67.9%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.49e-01 81.6% 91.6%
4lr4A01 2.60.120.1420 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.27e-01 99.3% 98.3%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 38.0 3.88e-01 77.2% 97.0%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.51 46.0 4.42e-01 100.0% 86.0%
4nreA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.51 35.0 3.75e-01 76.5% 81.7%
3cloC01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 37.0 3.30e-01 77.2% 52.8%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 4.03e-01 84.6% 89.2%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 4.05e-01 93.4% 94.5%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 46.0 3.76e-01 100.0% 67.9%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 4.28e-01 88.2% 100.0%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3716837 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 48.0 4.90e-01 100.0% 69.2%
3555892 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.71 48.0 4.48e-01 100.0% 55.3%
4991099 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.68 41.0 4.85e-01 100.0% 88.9%
441034 3386.1.1.4 ↗ beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.68 53.0 5.68e-01 90.4% 93.3%
3591997 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 45.0 4.66e-01 100.0% 70.8%
5046219 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 48.0 5.30e-01 100.0% 91.8%
3742116 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.66 46.0 4.97e-01 100.0% 84.3%
3583509 10.32.1.172 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.65 47.0 4.34e-01 100.0% 57.7%
5039888 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.65 43.0 4.47e-01 100.0% 72.0%
3960488 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.65 44.0 4.71e-01 100.0% 79.8%
3289166 10.20.1.2 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.64 44.0 4.69e-01 100.0% 79.2%
3240764 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.64 47.0 4.79e-01 100.0% 77.8%
5030450 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 46.0 4.53e-01 98.5% 69.7%
3593920 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 45.0 4.73e-01 100.0% 82.5%
5035593 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 43.0 4.76e-01 97.8% 91.4%
4955347 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 45.0 5.06e-01 100.0% 99.0%
3998968 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.61 47.0 4.65e-01 100.0% 75.9%
3936599 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.61 48.0 4.70e-01 100.0% 77.2%
5055872 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 53.0 5.12e-01 100.0% 83.9%
4393967 12.1.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 0.60 45.0 4.40e-01 86.8% 72.4%
3404052 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 47.0 4.68e-01 100.0% 80.0%
3598842 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.59 47.0 4.58e-01 98.5% 75.3%
3414624 4081.1.1.7 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.59 47.0 4.27e-01 99.3% 63.9%
4304353 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.58 49.0 4.72e-01 90.4% 97.4%
3267853 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.58 46.0 3.93e-01 97.1% 52.3%
3242233 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 40.0 4.50e-01 89.0% 94.3%
3830329 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.57 41.0 3.45e-01 98.5% 43.9%
3817281 10.1.1.58 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.57 41.0 3.50e-01 75.0% 92.2%
3398852 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 43.0 4.51e-01 100.0% 90.0%
3307805 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.56 47.0 4.35e-01 90.4% 93.5%
4608515 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 44.0 4.35e-01 89.0% 78.6%
5042588 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 40.0 4.54e-01 87.5% 100.0%
3814412 10.1.1.58 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.55 41.0 3.49e-01 76.5% 97.3%
3178885 10.1.1.16 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 0.54 42.0 3.72e-01 83.1% 89.5%
3817425 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 4.08e-01 99.3% 64.1%
3830647 868.1.1.5 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 0.53 39.0 3.43e-01 75.7% 99.0%
3830721 207.1.1.43 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.53 45.0 3.07e-01 99.3% 25.5%
3485290 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 46.0 3.86e-01 95.6% 71.9%
3785342 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 46.0 3.64e-01 100.0% 46.9%
3917421 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.52 42.0 4.11e-01 100.0% 78.0%
3316409 868.1.1.0 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.52 38.0 3.28e-01 76.5% 88.2%
4961993 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 42.0 4.20e-01 86.8% 100.0%
337395 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.52 42.0 4.16e-01 88.2% 98.0%
2523954 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.52 44.0 4.21e-01 100.0% 80.3%
3888728 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.51 43.0 4.32e-01 100.0% 89.6%
3488117 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 47.0 4.35e-01 100.0% 91.8%
3434999 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.51 43.0 4.04e-01 90.4% 95.2%
1111985 10.32.1.82 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM-like_2 0.51 46.0 4.09e-01 99.3% 99.5%
1209559 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 4.07e-01 89.7% 98.1%
5033996 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 46.0 3.81e-01 100.0% 58.0%
4500128 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 37.0 2.63e-01 76.5% 45.1%
4023675 3156.3.1.0 ↗ beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family 0.50 36.0 3.79e-01 83.1% 83.3%
3293359 10.32.1.33 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CIA30 0.50 43.0 3.76e-01 100.0% 61.5%
3886674 868.1.1.5 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 0.50 38.0 3.28e-01 77.2% 90.4%
3700379 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.50 46.0 4.46e-01 100.0% 92.8%
3279441 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.50 43.0 3.91e-01 96.3% 96.4%